Os09g0278700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os09g0278700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 143.89 | 0.564 | 11 | -0.834 | 1.9 | -0.298 | 1.07 | -3.1 | -0.834 | 6.29 | 0.07972 | 5370 | -- | -- |
| 144.17 | 0.559 | 11 | -0.52 | 1.92 | -0.935 | 0.992 | -- | -0.871 | 6.26 | 0.8068 | 23199 | -- | -- |
| 146.73 | 0.564 | 11 | -0.825 | 1.91 | -0.295 | -- | -3.06 | -0.837 | 6.3 | 0.08389 | 5369 | -- | -- |
| 146.13 | 0.563 | 11 | -0.501 | 1.88 | -0.973 | -- | -- | -0.888 | 6.34 | 0.7981 | 23645 | -- | -- |
| 334.67 | 0.852 | 11.1 | -0.814 | -- | -0.303 | -- | -2.61 | -0.801 | -- | 0.1944 | 4798 | -- | -- |
| 164.31 | 0.601 | 11 | -1.1 | 1.89 | -- | 0.937 | -- | -0.788 | 6.33 | -- | -- | -- | -- |
| 166.49 | 0.604 | 11 | -1.09 | 1.89 | -- | -- | -- | -0.791 | 6.34 | -- | -- | -- | -- |
| 328.1 | 0.844 | 11 | -0.531 | -- | -1.06 | -- | -- | -0.873 | -- | 0.6768 | 21958 | -- | -- |
| 150.75 | 0.572 | 11 | -- | 1.87 | -0.929 | -- | -- | -0.889 | 6.38 | 1.34 | 38714 | -- | -- |
| 352.48 | 0.877 | 11 | -1.04 | -- | -- | -- | -- | -0.75 | -- | -- | -- | -- | -- |
| 197.85 | 0.658 | 10.9 | -- | 1.88 | -- | -- | -- | -0.669 | 6.37 | -- | -- | -- | -- |
| 328.34 | 0.844 | 11 | -- | -- | -0.931 | -- | -- | -0.809 | -- | 2 | 34820 | -- | -- |
| 381.05 | 0.911 | 11 | -- | -- | -- | -- | -- | -0.635 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 141.69 | wind | 1.0 | 90 | < th | dose dependent | rect. | 24 | 1 |
| 2 | 142.77 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 11 |
| 3 | 142.93 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 4 | 142.96 | wind | 1.0 | 90 | < th | dose independent | rect. | 24 | 1 |
| 5 | 143.00 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 6 | 143.16 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 8 |
| 7 | 143.23 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 6 |
| 12 | 143.44 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 17 | 143.62 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 9 | 11 |
| 22 | 143.79 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 9 | 11 |
| 23 | 143.79 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 27 | 143.97 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 29 | 143.97 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 15 |
| 32 | 143.98 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 2 |
| 33 | 144.01 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 36 | 144.02 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 13 | 14 |
| 37 | 144.03 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 21 |
| 39 | 144.05 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 3 |
| 43 | 144.07 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 55 | 144.24 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 79 | 144.48 | radiation | 1.0 | 1440 | < th | dose dependent | sin | 21 | NA |
| 84 | 144.52 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 92 | 144.55 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 13 |
| 93 | 144.55 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 15 |
| 112 | 144.62 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 19 |
| 116 | 144.64 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 20 | NA |
| 122 | 144.67 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 20 | NA |
| 123 | 144.67 | wind | 7.0 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 125 | 144.67 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 20 | NA |
| 134 | 144.69 | wind | 5.0 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 172 | 144.82 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 9 | 6 |
| 183 | 144.86 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 12 | 10 |
| 200 | 144.91 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 13 | 9 |
| 203 | 144.91 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 13 | 9 |
| 211 | 144.92 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 20 | NA |
| 242 | 145.00 | wind | 7.0 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 255 | 145.02 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 274 | 145.07 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 14 |
| 280 | 145.08 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 14 |
| 282 | 145.08 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 14 |
| 284 | 145.09 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 9 | 6 |
| 286 | 145.09 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 9 |
| 296 | 145.11 | wind | 7.0 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 316 | 145.14 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 5 |
| 327 | 145.15 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 13 |
| 341 | 145.18 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 5 |
| 344 | 145.18 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 5 |
| 370 | 145.22 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 12 | 14 |
| 376 | 145.22 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 12 | 14 |
| 381 | 145.24 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 12 | 14 |
| 383 | 145.24 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 11 | 10 |
| 400 | 145.27 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 406 | 145.28 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 13 | 5 |
| 411 | 145.28 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 13 | 5 |
| 492 | 145.40 | humidity | 80.0 | 1440 | > th | dose independent | sin | 23 | NA |
| 522 | 145.44 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 13 | 5 |
| 524 | 145.44 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 7 |
| 540 | 145.46 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 9 |
| 558 | 145.49 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 7 | 12 |
| 559 | 145.49 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 7 | 15 |
| 561 | 145.49 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 7 | 17 |
| 591 | 145.53 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 7 | 21 |
| 650 | 145.60 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 672 | 145.65 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 692 | 145.68 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 10 | 8 |
| 759 | 145.75 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 6 | 6 |
| 790 | 145.78 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 11 | 10 |
| 791 | 145.79 | humidity | 80.0 | 1440 | < th | dose independent | sin | 23 | NA |
| 796 | 145.79 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 5 |
| 920 | 145.93 | radiation | 1.0 | 1440 | < th | dose independent | sin | 22 | NA |
| 921 | 145.93 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 929 | 145.94 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 7 | 12 |
| 957 | 145.97 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |