Os09g0278300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Phosphatidylinositol-4-phosphate 5-kinase family protein.
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Os09g0278300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Phosphatidylinositol-4-phosphate 5-kinase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22.97 | 0.225 | 8.41 | 0.405 | 0.523 | -0.332 | -0.224 | -1.12 | 0.11 | 5.7 | 26.2 | 10 | -- | -- |
| 25.09 | 0.235 | 8.43 | 0.226 | 0.515 | -0.28 | -0.447 | -- | 0.0674 | 5.61 | 26.5 | 4 | -- | -- |
| 23.08 | 0.225 | 8.41 | 0.415 | 0.522 | -0.336 | -- | -1.18 | 0.113 | 5.69 | 26.3 | 7 | -- | -- |
| 25.55 | 0.237 | 8.43 | 0.228 | 0.511 | -0.263 | -- | -- | 0.073 | 5.81 | 26.5 | 4 | -- | -- |
| 36.02 | 0.281 | 8.41 | 0.408 | -- | -0.265 | -- | -1.08 | 0.143 | -- | 24.1 | 10 | -- | -- |
| 26.28 | 0.24 | 8.42 | 0.293 | 0.48 | -- | -0.374 | -- | 0.129 | 6.11 | -- | -- | -- | -- |
| 26.58 | 0.241 | 8.41 | 0.29 | 0.479 | -- | -- | -- | 0.131 | 6.3 | -- | -- | -- | -- |
| 38.01 | 0.288 | 8.43 | 0.265 | -- | -0.175 | -- | -- | 0.114 | -- | 23.8 | 6 | -- | -- |
| 26.79 | 0.241 | 8.43 | -- | 0.529 | -0.358 | -- | -- | 0.0339 | 5.66 | 26.6 | 13 | -- | -- |
| 38.49 | 0.29 | 8.42 | 0.303 | -- | -- | -- | -- | 0.141 | -- | -- | -- | -- | -- |
| 28.8 | 0.251 | 8.42 | -- | 0.483 | -- | -- | -- | 0.0984 | 6.27 | -- | -- | -- | -- |
| 39.73 | 0.295 | 8.44 | -- | -- | -0.265 | -- | -- | 0.0736 | -- | 23.8 | 6 | -- | -- |
| 40.9 | 0.299 | 8.43 | -- | -- | -- | -- | -- | 0.107 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 22.54 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 16 | 22.74 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 19 | 22.77 | temperature | 25 | 10 | < th | dose dependent | rect. | 24 | 23 |
| 21 | 22.78 | temperature | 20 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 27 | 22.82 | temperature | 25 | 90 | < th | dose dependent | rect. | 24 | 23 |
| 30 | 22.83 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 17 |
| 45 | 22.89 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 15 |
| 51 | 22.91 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 89 | 23.01 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 7 |
| 113 | 23.05 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 7 |
| 157 | 23.11 | temperature | 20 | 4320 | > th | dose independent | rect. | 3 | 1 |
| 159 | 23.11 | temperature | 20 | 4320 | < th | dose independent | rect. | 1 | 3 |
| 170 | 23.12 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 13 |
| 215 | 23.16 | temperature | 20 | 4320 | > th | dose independent | rect. | 1 | 3 |
| 233 | 23.17 | temperature | 25 | 720 | < th | dose independent | rect. | 18 | 1 |
| 260 | 23.18 | temperature | 25 | 10 | < th | dose dependent | rect. | 8 | 23 |
| 268 | 23.19 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 297 | 23.20 | temperature | 25 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 310 | 23.21 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 311 | 23.21 | temperature | 25 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 350 | 23.23 | temperature | 25 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 355 | 23.24 | temperature | 20 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 388 | 23.25 | temperature | 25 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 426 | 23.29 | temperature | 20 | 4320 | > th | dose independent | sin | 11 | NA |
| 428 | 23.29 | temperature | 25 | 720 | < th | dose independent | rect. | 18 | 3 |
| 438 | 23.29 | temperature | 30 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 461 | 23.31 | temperature | 20 | 4320 | < th | dose independent | sin | 11 | NA |
| 463 | 23.31 | temperature | 20 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 479 | 23.32 | atmosphere | 1000 | 30 | > th | dose independent | rect. | 17 | 13 |
| 539 | 23.35 | temperature | 25 | 90 | < th | dose independent | rect. | 12 | 19 |
| 564 | 23.36 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 583 | 23.36 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 658 | 23.39 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 11 |
| 697 | 23.40 | radiation | 10 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 789 | 23.44 | atmosphere | 1000 | 270 | > th | dose independent | rect. | 16 | 13 |
| 815 | 23.44 | radiation | 10 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 827 | 23.45 | radiation | 10 | 10 | < th | dose dependent | no | NA | NA |
| 839 | 23.45 | radiation | 10 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 840 | 23.45 | radiation | 10 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 841 | 23.45 | radiation | 10 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 931 | 23.49 | humidity | 90 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 959 | 23.50 | atmosphere | 1000 | 720 | > th | dose independent | rect. | 17 | 10 |