FiT-DB / Search/ Help/ Sample detail

Os09g0278200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description :


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.53 (0.0204) R2 : 1.67e-07
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.000375 (0.0429) R2dN8 : 2.16e-07 R2N8 : 1.67e-07
σ : 0.384
deviance : 67.71
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
54.08 0.346 6.46 0.597 0.26 -0.467 0.735 2.23 0.184 8.92 21.86 488 -- --
56.58 0.35 6.51 0.183 0.308 -0.285 0.327 -- 0.0538 7.93 22.29 795 -- --
55.61 0.35 6.47 0.42 0.401 -0.379 -- 1.54 0.129 9 21.86 488 -- --
56.82 0.351 6.51 0.188 0.313 -0.291 -- -- 0.0558 7.48 22.38 809 -- --
58.36 0.356 6.46 0.607 -- -0.663 -- 2.01 0.189 -- 23.18 636 -- --
58.28 0.358 6.51 0.1 0.394 -- 0.422 -- 0.00802 8.14 -- -- -- --
58.76 0.359 6.51 0.111 0.398 -- -- -- 0.00692 7.82 -- -- -- --
60.23 0.361 6.51 0.224 -- -0.502 -- -- 0.0648 -- 24.2 688 -- --
57.68 0.354 6.51 -- 0.329 -0.238 -- -- 0.0263 7.52 22.65 808 -- --
67.35 0.383 6.52 0.116 -- -- -- -- 0.0124 -- -- -- -- --
59.08 0.36 6.52 -- 0.399 -- -- -- -0.00542 7.8 -- -- -- --
61.47 0.365 6.52 -- -- -0.459 -- -- 0.0329 -- 24.4 677 -- --
67.71 0.384 6.53 -- -- -- -- -- -0.000375 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 51.48 radiation 1 720 < th dose dependent rect. 17 8
2 52.00 temperature 30 270 < th dose dependent rect. 12 18
4 52.10 temperature 30 90 < th dose dependent rect. 13 20
16 52.40 temperature 30 10 < th dose dependent rect. 13 20
19 52.45 wind 1 43200 > th dose independent rect. 2 1
27 52.59 radiation 1 720 < th dose dependent rect. 11 14
33 52.63 radiation 1 720 < th dose independent rect. 17 8
35 52.65 wind 1 43200 < th dose dependent rect. 2 1
43 52.73 wind 1 43200 < th dose independent rect. 2 1
48 52.78 radiation 20 14400 < th dose independent rect. 19 11
52 52.79 radiation 1 720 < th dose independent rect. 15 9
72 52.91 radiation 10 1440 < th dose independent rect. 18 14
81 52.95 radiation 1 720 < th dose independent rect. 13 11
97 52.99 radiation 1 720 < th dose independent rect. 11 13
101 53.00 radiation 10 1440 < th dose independent rect. 6 2
114 53.03 radiation 10 1440 < th dose independent rect. 21 11
116 53.03 temperature 30 720 < th dose independent rect. 18 15
129 53.06 wind 1 43200 > th dose dependent rect. 11 6
130 53.06 wind 9 43200 < th dose dependent rect. 11 6
134 53.07 wind 9 43200 < th dose dependent rect. 12 3
138 53.08 wind 1 43200 > th dose dependent rect. 12 3
142 53.09 radiation 1 720 > th dose independent rect. 15 4
166 53.11 wind 1 43200 > th dose dependent rect. 13 1
194 53.14 wind 9 43200 < th dose dependent rect. 13 1
205 53.17 wind 1 43200 > th dose independent rect. 8 3
241 53.24 wind 5 43200 > th dose independent rect. 14 2
249 53.25 radiation 10 1440 < th dose independent sin 10 NA
264 53.27 wind 5 43200 < th dose independent rect. 15 1
285 53.30 wind 5 43200 < th dose independent rect. 13 4
323 53.37 temperature 25 720 < th dose independent rect. 9 15
327 53.37 radiation 20 1440 < th dose dependent rect. 18 14
348 53.40 temperature 10 720 > th dose dependent rect. 15 5
372 53.43 wind 1 43200 < th dose independent rect. 8 3
403 53.45 radiation 20 14400 < th dose independent rect. 21 9
409 53.45 radiation 1 1440 > th dose dependent rect. 18 11
434 53.48 radiation 20 1440 < th dose dependent rect. 2 6
445 53.49 radiation 20 1440 < th dose dependent rect. 4 4
490 53.52 radiation 20 1440 < th dose dependent rect. 22 10
508 53.53 radiation 1 1440 > th dose dependent rect. 18 14
556 53.58 wind 1 43200 < th dose dependent rect. 8 4
569 53.60 wind 7 43200 < th dose dependent sin 22 NA
579 53.61 wind 1 43200 > th dose dependent sin 22 NA
581 53.61 radiation 1 720 < th dose dependent sin 17 NA
601 53.63 temperature 10 720 > th dose dependent rect. 15 3
617 53.64 humidity 50 43200 < th dose dependent rect. 17 16
638 53.66 humidity 80 43200 < th dose dependent rect. 20 6
651 53.67 radiation 1 1440 > th dose dependent rect. 4 4
686 53.69 humidity 80 43200 < th dose dependent rect. 20 3
691 53.69 temperature 30 720 < th dose dependent rect. 11 13
739 53.72 temperature 30 720 < th dose dependent rect. 12 11
809 53.77 humidity 80 43200 < th dose independent rect. 21 1
823 53.77 temperature 20 270 > th dose dependent rect. 14 22
841 53.79 temperature 25 720 < th dose independent sin 19 NA
842 53.79 humidity 80 43200 > th dose independent rect. 20 4
866 53.80 humidity 80 43200 > th dose independent rect. 21 1
869 53.80 radiation 1 1440 > th dose dependent rect. 18 1
925 53.83 humidity 80 43200 < th dose independent rect. 20 3
940 53.84 temperature 25 720 < th dose independent rect. 15 6
951 53.85 radiation 30 14400 < th dose independent rect. 16 3
982 53.86 radiation 30 14400 < th dose independent rect. 16 8