Os09g0278000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0278000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 164.68 | 0.603 | 14.4 | -1.73 | 2.11 | 1.72 | 0.995 | -6.33 | -0.965 | 19.5 | 25.15 | 970 | -- | -- |
| 172.47 | 0.612 | 14.3 | -0.46 | 1.96 | 1.31 | -0.0936 | -- | -0.695 | 20.1 | 24.21 | 632 | -- | -- |
| 167.08 | 0.602 | 14.4 | -1.71 | 2.12 | 1.7 | -- | -6.23 | -0.916 | 19.6 | 25.57 | 979 | -- | -- |
| 171.91 | 0.611 | 14.3 | -0.466 | 1.85 | 1.38 | -- | -- | -0.691 | 20.1 | 24.47 | 636 | -- | -- |
| 285.95 | 0.788 | 14.4 | -1.65 | -- | 3.24 | -- | -5.57 | -1.06 | -- | 24.5 | 628 | -- | -- |
| 207.44 | 0.675 | 14.3 | -0.166 | 2.41 | -- | 0.527 | -- | -0.555 | 19.9 | -- | -- | -- | -- |
| 208.24 | 0.676 | 14.3 | -0.18 | 2.41 | -- | -- | -- | -0.555 | 19.9 | -- | -- | -- | -- |
| 300.55 | 0.807 | 14.3 | -0.759 | -- | 2.8 | -- | -- | -0.861 | -- | 24.4 | 612 | -- | -- |
| 177.28 | 0.62 | 14.3 | -- | 1.9 | 1.26 | -- | -- | -0.624 | 20.1 | 24.59 | 634 | -- | -- |
| 524.81 | 1.07 | 14.2 | -0.207 | -- | -- | -- | -- | -0.587 | -- | -- | -- | -- | -- |
| 209.1 | 0.676 | 14.3 | -- | 2.41 | -- | -- | -- | -0.535 | 19.9 | -- | -- | -- | -- |
| 315.05 | 0.827 | 14.2 | -- | -- | 2.69 | -- | -- | -0.751 | -- | 24.5 | 603 | -- | -- |
| 525.94 | 1.07 | 14.2 | -- | -- | -- | -- | -- | -0.565 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 151.08 | temperature | 15 | 270 | > th | dose dependent | rect. | 13 | 15 |
| 28 | 156.98 | temperature | 20 | 10 | > th | dose dependent | rect. | 16 | 13 |
| 41 | 158.58 | temperature | 15 | 270 | > th | dose dependent | sin | 16 | NA |
| 46 | 158.94 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 9 |
| 89 | 161.36 | temperature | 25 | 720 | > th | dose dependent | rect. | 16 | 3 |
| 140 | 163.38 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 6 |
| 152 | 163.71 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 9 |
| 189 | 164.65 | temperature | 25 | 720 | > th | dose dependent | rect. | 15 | 19 |
| 202 | 164.96 | temperature | 10 | 720 | > th | dose dependent | rect. | 9 | 10 |
| 211 | 165.19 | temperature | 25 | 270 | < th | dose independent | rect. | 17 | 7 |
| 240 | 165.72 | temperature | 10 | 720 | > th | dose dependent | rect. | 8 | 13 |
| 267 | 166.10 | temperature | 30 | 10 | < th | dose dependent | rect. | 14 | 12 |
| 269 | 166.11 | temperature | 25 | 720 | > th | dose dependent | rect. | 11 | 10 |
| 284 | 166.25 | temperature | 30 | 270 | < th | dose dependent | sin | 17 | NA |
| 310 | 166.47 | temperature | 25 | 720 | > th | dose independent | rect. | 17 | 2 |
| 320 | 166.53 | temperature | 25 | 720 | > th | dose dependent | rect. | 11 | 21 |
| 391 | 167.04 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 7 |
| 411 | 167.19 | temperature | 30 | 90 | < th | dose dependent | sin | 15 | NA |
| 431 | 167.30 | temperature | 25 | 720 | > th | dose independent | rect. | 16 | 4 |
| 488 | 167.73 | temperature | 30 | 270 | < th | dose independent | rect. | 4 | 20 |
| 501 | 167.83 | temperature | 25 | 720 | > th | dose dependent | rect. | 22 | 23 |
| 512 | 167.88 | temperature | 25 | 720 | > th | dose dependent | no | NA | NA |
| 530 | 167.95 | temperature | 10 | 720 | > th | dose dependent | sin | 20 | NA |
| 563 | 168.12 | temperature | 20 | 90 | > th | dose independent | rect. | 15 | 14 |
| 614 | 168.43 | temperature | 30 | 10 | < th | dose dependent | rect. | 12 | 14 |
| 726 | 169.32 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 1 |