Os09g0274900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0274900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 316.1 | 0.835 | 7.06 | -2.17 | 0.724 | 1.9 | 0.908 | -2.14 | -0.432 | 20.5 | 20.5 | 669 | -- | -- |
| 327.07 | 0.842 | 7 | -1.75 | 0.69 | 2.08 | 0.156 | -- | -0.338 | 21 | 20.59 | 594 | -- | -- |
| 317.97 | 0.831 | 7.04 | -2.08 | 0.717 | 1.92 | -- | -1.78 | -0.396 | 20.9 | 20.6 | 627 | -- | -- |
| 327.02 | 0.842 | 7 | -1.77 | 0.7 | 2.11 | -- | -- | -0.339 | 21.1 | 20.56 | 591 | -- | -- |
| 346.04 | 0.866 | 7.03 | -2.17 | -- | 2.14 | -- | -1.59 | -0.457 | -- | 20.5 | 655 | -- | -- |
| 460.59 | 1.01 | 6.91 | -1.02 | 0.99 | -- | 0.184 | -- | 0.121 | 20.9 | -- | -- | -- | -- |
| 460.7 | 1.01 | 6.91 | -1.03 | 0.989 | -- | -- | -- | 0.121 | 20.9 | -- | -- | -- | -- |
| 353.83 | 0.876 | 6.99 | -1.86 | -- | 2.29 | -- | -- | -0.382 | -- | 20.54 | 650 | -- | -- |
| 400.15 | 0.932 | 6.94 | -- | 0.805 | 1.61 | -- | -- | -0.0507 | 21.2 | 20.59 | 485 | -- | -- |
| 516.68 | 1.06 | 6.88 | -1.03 | -- | -- | -- | -- | 0.114 | -- | -- | -- | -- | -- |
| 488.74 | 1.03 | 6.88 | -- | 0.991 | -- | -- | -- | 0.236 | 20.9 | -- | -- | -- | -- |
| 434.23 | 0.971 | 6.92 | -- | -- | 1.79 | -- | -- | -0.0912 | -- | 20.5 | 594 | -- | -- |
| 544.7 | 1.09 | 6.85 | -- | -- | -- | -- | -- | 0.228 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 307.13 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 4 |
| 2 | 308.26 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 4 |
| 3 | 308.28 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 2 |
| 7 | 308.88 | temperature | 20 | 720 | > th | dose independent | rect. | 16 | 17 |
| 8 | 308.99 | temperature | 20 | 270 | > th | dose independent | rect. | 12 | 21 |
| 11 | 309.27 | temperature | 20 | 720 | < th | dose independent | rect. | 18 | 16 |
| 13 | 309.33 | temperature | 20 | 720 | > th | dose independent | rect. | 18 | 15 |
| 34 | 311.13 | temperature | 20 | 720 | > th | dose independent | sin | 11 | NA |
| 41 | 311.48 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 11 |
| 42 | 311.57 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 11 |
| 50 | 311.87 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 13 |
| 58 | 312.12 | temperature | 20 | 720 | < th | dose independent | sin | 11 | NA |
| 301 | 318.96 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 339 | 319.75 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 459 | 322.41 | temperature | 20 | 720 | > th | dose independent | no | NA | NA |
| 466 | 322.67 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 23 |
| 488 | 323.14 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 491 | 323.21 | temperature | 20 | 720 | < th | dose independent | no | NA | NA |
| 499 | 323.40 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 23 |
| 574 | 324.79 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 23 |
| 588 | 325.01 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 23 |
| 589 | 325.02 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 599 | 325.19 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 8 |
| 827 | 328.58 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 23 |
| 945 | 330.08 | wind | 1 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 951 | 330.14 | temperature | 25 | 1440 | < th | dose dependent | sin | 10 | NA |