Os09g0271100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os09g0271100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 154.59 | 0.584 | 12.7 | 0.327 | 0.429 | 1.1 | 0.191 | -2.62 | 0.346 | 9.15 | 20.7 | 3147 | -- | -- |
| 169.34 | 0.606 | 12.7 | 0.474 | 0.462 | 1.51 | 0.22 | -- | 0.324 | 9.21 | 21.1 | 10565 | -- | -- |
| 154.67 | 0.579 | 12.7 | 0.335 | 0.424 | 1.09 | -- | -2.64 | 0.348 | 9.42 | 20.69 | 3146 | -- | -- |
| 165.23 | 0.599 | 12.6 | 0.802 | 0.448 | 1.5 | -- | -- | 0.447 | 8.96 | 20.7 | 3573 | -- | -- |
| 165.32 | 0.599 | 12.7 | 0.322 | -- | 1.07 | -- | -2.7 | 0.357 | -- | 20.6 | 3129 | -- | -- |
| 212.56 | 0.683 | 12.5 | 1.69 | 0.423 | -- | 0.178 | -- | 0.887 | 8.9 | -- | -- | -- | -- |
| 212.63 | 0.683 | 12.5 | 1.69 | 0.42 | -- | -- | -- | 0.888 | 9.14 | -- | -- | -- | -- |
| 176.52 | 0.619 | 12.7 | 0.848 | -- | 1.44 | -- | -- | 0.445 | -- | 21.2 | 4233 | -- | -- |
| 161.77 | 0.592 | 12.7 | -- | 0.487 | 1.83 | -- | -- | 0.268 | 8.76 | 19.5 | 21537 | -- | -- |
| 222.85 | 0.698 | 12.5 | 1.69 | -- | -- | -- | -- | 0.89 | -- | -- | -- | -- | -- |
| 288.16 | 0.794 | 12.6 | -- | 0.423 | -- | -- | -- | 0.7 | 8.84 | -- | -- | -- | -- |
| 171.06 | 0.609 | 12.7 | -- | -- | 1.91 | -- | -- | 0.305 | -- | 18.79 | 21738 | -- | -- |
| 298.34 | 0.806 | 12.6 | -- | -- | -- | -- | -- | 0.703 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 147.66 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 2 | 15 |
| 3 | 147.78 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 24 | 19 |
| 26 | 149.07 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 3 | NA |
| 32 | 149.63 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 52 | 150.87 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 64 | 151.19 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 66 | 151.30 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 16 | 16 |
| 81 | 151.48 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 10 | 21 |
| 88 | 151.84 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 12 | 3 |
| 96 | 152.07 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 22 | 9 |
| 106 | 152.19 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 113 | 152.46 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 21 | 10 |
| 116 | 152.47 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 23 | 18 |
| 117 | 152.50 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 133 | 152.76 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 22 | 2 |
| 138 | 152.86 | humidity | 90.0 | 14400 | > th | dose dependent | no | NA | NA |
| 148 | 153.07 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 20 | 3 |
| 153 | 153.10 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 23 |
| 155 | 153.17 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 168 | 153.28 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 21 | 6 |
| 179 | 153.34 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 2 | 23 |
| 200 | 153.49 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 21 | 6 |
| 213 | 153.58 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 1 | 6 |
| 245 | 153.83 | radiation | 30.0 | 4320 | > th | dose independent | rect. | 16 | 16 |
| 263 | 154.08 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 271 | 154.12 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 1 | 6 |
| 289 | 154.26 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 23 | 2 |
| 299 | 154.34 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 23 | 18 |
| 302 | 154.38 | radiation | 30.0 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 335 | 154.55 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 13 | 4 |
| 367 | 154.85 | wind | 3.0 | 43200 | < th | dose independent | rect. | 10 | 2 |
| 395 | 155.03 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 12 | 3 |
| 417 | 155.20 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 436 | 155.27 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 437 | 155.27 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 456 | 155.48 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 12 | 5 |
| 461 | 155.49 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 10 | 21 |
| 462 | 155.50 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 463 | 155.50 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 473 | 155.56 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 10 | 2 |
| 482 | 155.61 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 15 | 2 |
| 489 | 155.69 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 506 | 155.80 | wind | 3.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 509 | 155.82 | wind | 3.0 | 43200 | < th | dose independent | rect. | 8 | 4 |
| 526 | 155.96 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 531 | 155.97 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 549 | 156.06 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 6 | 3 |
| 551 | 156.07 | wind | 3.0 | 43200 | > th | dose independent | rect. | 8 | 4 |
| 574 | 156.22 | temperature | 20.0 | 1440 | > th | dose independent | sin | 10 | NA |
| 575 | 156.22 | wind | 3.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 596 | 156.35 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 608 | 156.43 | temperature | 20.0 | 1440 | < th | dose independent | sin | 10 | NA |
| 643 | 156.56 | wind | 3.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 659 | 156.62 | humidity | 90.0 | 14400 | > th | dose independent | sin | 5 | NA |
| 679 | 156.73 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 22 | 3 |
| 715 | 156.91 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 16 | 16 |
| 717 | 156.92 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 720 | 156.92 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 3 |
| 725 | 156.97 | wind | 7.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 746 | 157.12 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 749 | 157.12 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 755 | 157.17 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 3 |
| 761 | 157.20 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 5 | 3 |
| 765 | 157.22 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 11 | 17 |
| 788 | 157.30 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 22 |
| 811 | 157.40 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 828 | 157.49 | wind | 9.0 | 43200 | > th | dose independent | rect. | 9 | 5 |
| 845 | 157.59 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 11 | 20 |
| 849 | 157.63 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 2 | 6 |
| 855 | 157.66 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 4 | 9 |
| 857 | 157.67 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 1 | 7 |
| 859 | 157.67 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 1 | 7 |
| 870 | 157.71 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 1 | 7 |
| 877 | 157.73 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 8 | 4 |
| 901 | 157.84 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 9 | 1 |
| 909 | 157.87 | wind | 9.0 | 43200 | > th | dose independent | rect. | 8 | 7 |
| 913 | 157.88 | wind | 7.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 922 | 157.91 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 18 | 10 |
| 930 | 157.95 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 22 |
| 937 | 157.97 | wind | 9.0 | 43200 | > th | dose independent | rect. | 4 | 11 |
| 951 | 158.02 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 953 | 158.02 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 1 | 7 |
| 959 | 158.05 | wind | 9.0 | 43200 | > th | dose independent | rect. | 2 | 13 |
| 976 | 158.10 | wind | 9.0 | 43200 | > th | dose independent | rect. | 24 | 15 |
| 979 | 158.10 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 8 | 4 |
| 983 | 158.12 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 22 | 10 |
| 986 | 158.13 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 20 | 12 |
| 988 | 158.13 | wind | 9.0 | 43200 | > th | dose independent | rect. | 22 | 17 |
| 989 | 158.13 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 8 | 4 |
| 993 | 158.16 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 24 | 8 |