Os09g0269900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0269900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 168.66 | 0.61 | 7.87 | -2.36 | 0.676 | -4.58 | 0.902 | -1.43 | -0.224 | 14.8 | 29.85 | 1562 | -- | -- |
| 170.26 | 0.608 | 7.89 | -2.67 | 0.654 | -4.51 | 0.898 | -- | -0.262 | 14.7 | 30.51 | 1584 | -- | -- |
| 171.36 | 0.61 | 7.87 | -2.35 | 0.676 | -4.57 | -- | -1.35 | -0.224 | 14.9 | 29.74 | 1570 | -- | -- |
| 172.91 | 0.612 | 7.9 | -2.65 | 0.673 | -4.52 | -- | -- | -0.267 | 15 | 30.4 | 1574 | -- | -- |
| 192.03 | 0.645 | 7.87 | -2.41 | -- | -4.51 | -- | -1.29 | -0.255 | -- | 29.6 | 1699 | -- | -- |
| 503.41 | 1.05 | 7.68 | -1.2 | 0.628 | -- | 0.762 | -- | 0.702 | 15 | -- | -- | -- | -- |
| 505.28 | 1.05 | 7.68 | -1.18 | 0.636 | -- | -- | -- | 0.707 | 15.2 | -- | -- | -- | -- |
| 193.52 | 0.648 | 7.9 | -2.69 | -- | -4.47 | -- | -- | -0.307 | -- | 30.01 | 1711 | -- | -- |
| 323.56 | 0.842 | 7.79 | -- | 0.661 | -3.86 | -- | -- | 0.221 | 1.19 | 30.4 | 1574 | -- | -- |
| 528.27 | 1.07 | 7.68 | -1.21 | -- | -- | -- | -- | 0.691 | -- | -- | -- | -- | -- |
| 542.14 | 1.09 | 7.65 | -- | 0.659 | -- | -- | -- | 0.839 | 15.2 | -- | -- | -- | -- |
| 342.44 | 0.865 | 7.75 | -- | -- | -3.36 | -- | -- | 0.358 | -- | 31.5 | 1684 | -- | -- |
| 566.87 | 1.11 | 7.65 | -- | -- | -- | -- | -- | 0.825 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 166.02 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 20 |
| 15 | 167.99 | temperature | 15 | 1440 | > th | dose dependent | rect. | 17 | 19 |
| 69 | 170.23 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 74 | 170.27 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 79 | 170.35 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 23 |
| 84 | 170.44 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 23 |
| 93 | 170.59 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 153 | 171.53 | temperature | 20 | 1440 | > th | dose dependent | sin | 7 | NA |
| 169 | 171.65 | temperature | 30 | 1440 | < th | dose dependent | sin | 6 | NA |
| 222 | 172.40 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 11 |
| 378 | 174.58 | temperature | 30 | 1440 | < th | dose dependent | sin | 14 | NA |
| 382 | 174.68 | temperature | 30 | 270 | < th | dose dependent | rect. | 20 | 23 |
| 387 | 174.70 | temperature | 30 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 392 | 174.81 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 10 |
| 503 | 176.19 | temperature | 15 | 1440 | > th | dose dependent | no | NA | NA |
| 535 | 176.54 | temperature | 15 | 1440 | > th | dose dependent | rect. | 8 | 23 |
| 542 | 176.60 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 23 |
| 593 | 177.11 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 23 |
| 599 | 177.14 | temperature | 15 | 1440 | > th | dose dependent | rect. | 17 | 10 |
| 882 | 179.97 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 957 | 180.71 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 962 | 180.76 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |