Os09g0268300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Monosaccharide transporter.
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Os09g0268300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Monosaccharide transporter.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 75.4 | 0.408 | 13.2 | 2.73 | 1.42 | 0.898 | -1.64 | 0.209 | 0.527 | 22.1 | 21.1 | 3789 | -- | -- |
| 75.44 | 0.405 | 13.2 | 2.7 | 1.42 | 0.871 | -1.6 | -- | 0.518 | 22.2 | 21.1 | 3690 | -- | -- |
| 85.81 | 0.431 | 13.2 | 2.78 | 1.43 | 0.905 | -- | 0.089 | 0.515 | 22.2 | 21 | 3682 | -- | -- |
| 85.64 | 0.431 | 13.2 | 2.77 | 1.42 | 0.865 | -- | -- | 0.537 | 22.3 | 21.1 | 3672 | -- | -- |
| 209.26 | 0.674 | 13.2 | 2.85 | -- | 0.98 | -- | 0.199 | 0.513 | -- | 21.6 | 3689 | -- | -- |
| 92.56 | 0.451 | 13.1 | 3.21 | 1.46 | -- | -1.58 | -- | 0.787 | 22.2 | -- | -- | -- | -- |
| 102.4 | 0.474 | 13.1 | 3.27 | 1.47 | -- | -- | -- | 0.789 | 22.4 | -- | -- | -- | -- |
| 188.93 | 0.64 | 13.2 | 2.9 | -- | 1.01 | -- | -- | 0.469 | -- | 21.9 | 824 | -- | -- |
| 104.85 | 0.477 | 13.4 | -- | 1.46 | 2.66 | -- | -- | -0.222 | 22.3 | 18.7 | 47520 | -- | -- |
| 234.38 | 0.715 | 13.1 | 3.29 | -- | -- | -- | -- | 0.794 | -- | -- | -- | -- | -- |
| 384.22 | 0.917 | 13.2 | -- | 1.49 | -- | -- | -- | 0.425 | 22.6 | -- | -- | -- | -- |
| 230.87 | 0.708 | 13.3 | -- | -- | 2.67 | -- | -- | -0.229 | -- | 18.6 | 47520 | -- | -- |
| 520.64 | 1.07 | 13.2 | -- | -- | -- | -- | -- | 0.429 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 65.20 | temperature | 20 | 720 | > th | dose dependent | rect. | 3 | 7 |
| 28 | 67.88 | temperature | 20 | 720 | > th | dose dependent | sin | 6 | NA |
| 32 | 68.15 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 6 |
| 48 | 68.98 | temperature | 25 | 720 | > th | dose independent | rect. | 6 | 4 |
| 51 | 69.08 | temperature | 25 | 720 | > th | dose independent | rect. | 4 | 7 |
| 67 | 69.49 | temperature | 25 | 720 | > th | dose independent | rect. | 7 | 1 |
| 75 | 69.70 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 2 |
| 76 | 69.76 | temperature | 20 | 720 | > th | dose independent | rect. | 4 | 2 |
| 95 | 70.27 | wind | 1 | 43200 | < th | dose dependent | rect. | 20 | 8 |
| 119 | 70.55 | radiation | 10 | 43200 | < th | dose dependent | rect. | 18 | 14 |
| 125 | 70.62 | radiation | 10 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 131 | 70.72 | radiation | 20 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 137 | 70.80 | radiation | 10 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 148 | 70.81 | radiation | 10 | 43200 | < th | dose dependent | rect. | 22 | 9 |
| 151 | 70.81 | radiation | 10 | 43200 | < th | dose dependent | rect. | 20 | 11 |
| 158 | 70.83 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 6 |
| 166 | 70.93 | radiation | 1 | 14400 | > th | dose independent | rect. | 9 | 3 |
| 172 | 70.96 | radiation | 30 | 43200 | > th | dose dependent | rect. | 14 | 18 |
| 179 | 71.01 | radiation | 20 | 43200 | < th | dose independent | rect. | 15 | 6 |
| 182 | 71.01 | radiation | 20 | 43200 | < th | dose independent | rect. | 15 | 10 |
| 183 | 71.02 | radiation | 20 | 43200 | < th | dose independent | rect. | 15 | 3 |
| 218 | 71.09 | radiation | 30 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 233 | 71.09 | radiation | 20 | 43200 | > th | dose dependent | rect. | 14 | 3 |
| 269 | 71.22 | radiation | 1 | 14400 | < th | dose independent | rect. | 9 | 3 |
| 378 | 71.47 | radiation | 40 | 43200 | < th | dose dependent | rect. | 15 | 17 |
| 384 | 71.52 | temperature | 20 | 4320 | < th | dose independent | rect. | 4 | 1 |
| 425 | 71.58 | temperature | 20 | 4320 | > th | dose independent | rect. | 4 | 1 |
| 454 | 71.66 | radiation | 30 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 470 | 71.67 | radiation | 10 | 43200 | < th | dose dependent | sin | 11 | NA |
| 532 | 71.80 | radiation | 30 | 43200 | < th | dose independent | sin | 14 | NA |
| 533 | 71.80 | wind | 1 | 43200 | < th | dose independent | rect. | 19 | 9 |
| 588 | 71.92 | radiation | 20 | 43200 | > th | dose dependent | sin | 14 | NA |
| 643 | 72.06 | radiation | 40 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 709 | 72.16 | temperature | 15 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 712 | 72.16 | radiation | 1 | 43200 | > th | dose dependent | sin | 13 | NA |
| 736 | 72.19 | radiation | 40 | 43200 | < th | dose independent | rect. | 24 | 8 |
| 750 | 72.20 | radiation | 40 | 43200 | < th | dose dependent | sin | 13 | NA |
| 758 | 72.21 | radiation | 40 | 43200 | < th | dose independent | rect. | 22 | 10 |
| 766 | 72.22 | wind | 1 | 43200 | < th | dose dependent | sin | 14 | NA |
| 816 | 72.27 | wind | 1 | 43200 | > th | dose independent | rect. | 19 | 9 |
| 852 | 72.31 | temperature | 15 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 868 | 72.32 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 19 | 3 |
| 871 | 72.33 | temperature | 15 | 43200 | > th | dose independent | rect. | 24 | 3 |
| 899 | 72.35 | temperature | 15 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 968 | 72.44 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 15 | 6 |
| 982 | 72.44 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 18 | 5 |
| 994 | 72.46 | radiation | 1 | 43200 | > th | dose dependent | rect. | 4 | 2 |