Os09g0267800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0267800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 136.53 | 0.549 | 8.1 | 1.53 | 0.49 | -2.95 | 0.0423 | -3.84 | 0.993 | 1.19 | 20.19 | 5091 | -- | -- |
| 139.45 | 0.55 | 8.23 | 1.26 | 0.47 | -1.67 | 0.0956 | -- | 0.854 | 1.4 | 22.31 | 6575 | -- | -- |
| 136.39 | 0.544 | 8.09 | 1.52 | 0.489 | -3.05 | -- | -4.03 | 1 | 0.96 | 19.96 | 5154 | -- | -- |
| 138.63 | 0.548 | 8.21 | 1.46 | 0.486 | -1.41 | -- | -- | 0.921 | 1.16 | 22.6 | 5198 | -- | -- |
| 149.89 | 0.57 | 7.97 | 1.6 | -- | -5.21 | -- | -8.97 | 1.1 | -- | 18.7 | 5117 | -- | -- |
| 161.57 | 0.596 | 8.14 | 2.18 | 0.528 | -- | 0.0315 | -- | 1.23 | 1.15 | -- | -- | -- | -- |
| 161.58 | 0.595 | 8.14 | 2.18 | 0.528 | -- | -- | -- | 1.23 | 1.15 | -- | -- | -- | -- |
| 153.31 | 0.577 | 8.21 | 1.45 | -- | -1.45 | -- | -- | 0.914 | -- | 22.8 | 5239 | -- | -- |
| 131.54 | 0.534 | 8.33 | -- | 0.483 | -2.01 | -- | -- | 0.39 | 1.15 | 35.69 | 47520 | -- | -- |
| 178.83 | 0.625 | 8.13 | 2.2 | -- | -- | -- | -- | 1.24 | -- | -- | -- | -- | -- |
| 287.11 | 0.793 | 8.19 | -- | 0.565 | -- | -- | -- | 0.989 | 1.3 | -- | -- | -- | -- |
| 145.94 | 0.563 | 8.31 | -- | -- | -2.06 | -- | -- | 0.429 | -- | 24.94 | 47520 | -- | -- |
| 306.81 | 0.818 | 8.18 | -- | -- | -- | -- | -- | 0.999 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 110.86 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 2 | 110.91 | wind | 7.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 3 | 111.55 | wind | 7.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 14 | 115.07 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 24 | 3 |
| 18 | 115.37 | wind | 7.0 | 14400 | < th | dose independent | rect. | 16 | 5 |
| 20 | 115.50 | wind | 7.0 | 14400 | > th | dose independent | rect. | 16 | 5 |
| 30 | 116.05 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 39 | 116.49 | wind | 1.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 50 | 116.88 | wind | 1.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 61 | 117.32 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 81 | 117.77 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 15 | 6 |
| 121 | 118.23 | wind | 1.0 | 14400 | < th | dose independent | rect. | 23 | 4 |
| 147 | 118.44 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 15 | 6 |
| 173 | 118.54 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 3 |
| 194 | 118.63 | atmosphere | 1000.0 | 14400 | > th | dose dependent | sin | 18 | NA |
| 233 | 118.76 | atmosphere | 1005.0 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 247 | 118.81 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 257 | 118.84 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 259 | 118.84 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 17 | 3 |
| 332 | 119.02 | atmosphere | 1005.0 | 14400 | > th | dose dependent | rect. | 21 | 4 |
| 437 | 119.20 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 23 | 22 |
| 446 | 119.22 | atmosphere | 1000.0 | 14400 | > th | dose dependent | no | NA | NA |
| 550 | 119.42 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 676 | 119.74 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 12 | 2 |
| 734 | 119.88 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 752 | 119.92 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 766 | 119.95 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 12 | 21 |
| 774 | 119.96 | wind | 1.0 | 14400 | > th | dose independent | rect. | 23 | 4 |
| 785 | 119.99 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 24 | 1 |
| 830 | 120.08 | radiation | 1.0 | 43200 | > th | dose dependent | rect. | 16 | 16 |
| 858 | 120.13 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 17 | 15 |
| 867 | 120.17 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 13 | 4 |
| 869 | 120.17 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 2 | 4 |
| 935 | 120.28 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 7 | 12 |
| 949 | 120.29 | radiation | 10.0 | 43200 | < th | dose independent | sin | 21 | NA |
| 960 | 120.31 | radiation | 30.0 | 43200 | > th | dose independent | rect. | 7 | 1 |