Os09g0266100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0266100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 80.63 | 0.422 | 6.96 | 2.13 | 1.33 | -1.4 | 0.215 | -5.92 | -0.231 | 19.8 | 23.06 | 5500 | -- | -- |
| 103.97 | 0.475 | 7.15 | 1.38 | 1.31 | -0.348 | 0.308 | -- | -0.409 | 19.8 | 33.07 | 3006 | -- | -- |
| 79.2 | 0.414 | 6.92 | 2.01 | 1.31 | -1.91 | -- | -7.27 | -0.233 | 19.7 | 22.27 | 6879 | -- | -- |
| 103.56 | 0.474 | 7.16 | 1.37 | 1.33 | -0.401 | -- | -- | -0.419 | 19.8 | 43.54 | 1651 | -- | -- |
| 174.04 | 0.614 | 6.89 | 1.82 | -- | -1.99 | -- | -6.98 | -0.271 | -- | 22.62 | 8072 | -- | -- |
| 106.07 | 0.483 | 7.14 | 1.51 | 1.33 | -- | 0.224 | -- | -0.345 | 19.9 | -- | -- | -- | -- |
| 106.21 | 0.483 | 7.14 | 1.5 | 1.33 | -- | -- | -- | -0.344 | 19.8 | -- | -- | -- | -- |
| 166.29 | 0.601 | 7.16 | 1.13 | -- | -1.54 | -- | -- | -0.588 | -- | 50.62 | 575 | -- | -- |
| 105.55 | 0.479 | 7.26 | -- | 1.33 | -1.25 | -- | -- | -0.884 | 19.8 | 63.59 | 47520 | -- | -- |
| 202.77 | 0.665 | 7.11 | 1.49 | -- | -- | -- | -- | -0.363 | -- | -- | -- | -- | -- |
| 165.64 | 0.602 | 7.18 | -- | 1.32 | -- | -- | -- | -0.512 | 19.9 | -- | -- | -- | -- |
| 196.95 | 0.654 | 7.2 | -- | -- | -1.95 | -- | -- | -0.764 | -- | 70.18 | 601 | -- | -- |
| 261.01 | 0.754 | 7.15 | -- | -- | -- | -- | -- | -0.528 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 78.19 | temperature | 20 | 14400 | < th | dose dependent | rect. | 2 | 15 |
| 3 | 78.19 | temperature | 20 | 14400 | < th | dose dependent | rect. | 22 | 20 |
| 22 | 78.27 | temperature | 20 | 14400 | < th | dose dependent | rect. | 22 | 6 |
| 30 | 78.28 | temperature | 20 | 14400 | < th | dose dependent | rect. | 10 | 20 |
| 60 | 78.35 | temperature | 20 | 14400 | < th | dose dependent | sin | 4 | NA |
| 97 | 78.40 | temperature | 20 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 118 | 78.42 | temperature | 20 | 14400 | < th | dose dependent | no | NA | NA |
| 148 | 78.43 | temperature | 20 | 14400 | < th | dose dependent | rect. | 2 | 23 |
| 179 | 78.46 | temperature | 20 | 14400 | < th | dose dependent | rect. | 23 | 2 |
| 227 | 78.54 | temperature | 20 | 14400 | < th | dose dependent | rect. | 5 | 23 |
| 259 | 78.64 | radiation | 40 | 43200 | < th | dose dependent | rect. | 24 | 5 |
| 304 | 78.99 | radiation | 20 | 43200 | < th | dose independent | rect. | 24 | 6 |
| 328 | 79.13 | humidity | 70 | 43200 | > th | dose dependent | rect. | 22 | 3 |
| 329 | 79.14 | humidity | 70 | 43200 | > th | dose dependent | rect. | 24 | 1 |
| 330 | 79.14 | humidity | 60 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 336 | 79.20 | humidity | 90 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 354 | 79.32 | humidity | 70 | 43200 | > th | dose independent | rect. | 1 | 7 |
| 371 | 79.39 | humidity | 60 | 43200 | < th | dose dependent | rect. | 18 | 18 |
| 396 | 79.50 | humidity | 60 | 43200 | < th | dose dependent | rect. | 21 | 15 |
| 400 | 79.51 | humidity | 60 | 43200 | < th | dose dependent | rect. | 24 | 12 |
| 407 | 79.52 | humidity | 60 | 43200 | < th | dose dependent | rect. | 2 | 10 |
| 431 | 79.63 | humidity | 70 | 43200 | > th | dose independent | rect. | 23 | 10 |
| 442 | 79.68 | humidity | 70 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 444 | 79.68 | humidity | 60 | 43200 | < th | dose independent | rect. | 19 | 16 |
| 468 | 79.79 | humidity | 70 | 43200 | < th | dose independent | rect. | 23 | 10 |
| 500 | 79.99 | humidity | 50 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 504 | 80.00 | humidity | 60 | 43200 | > th | dose independent | rect. | 19 | 15 |
| 512 | 80.03 | radiation | 40 | 43200 | < th | dose dependent | rect. | 19 | 10 |
| 538 | 80.19 | radiation | 40 | 43200 | < th | dose dependent | rect. | 18 | 3 |
| 548 | 80.22 | humidity | 50 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 581 | 80.31 | radiation | 10 | 43200 | < th | dose dependent | rect. | 18 | 11 |
| 598 | 80.35 | radiation | 40 | 43200 | < th | dose dependent | rect. | 2 | 3 |
| 611 | 80.38 | radiation | 10 | 43200 | < th | dose dependent | rect. | 18 | 7 |
| 670 | 80.54 | humidity | 60 | 43200 | < th | dose dependent | sin | 8 | NA |
| 675 | 80.57 | humidity | 70 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 687 | 80.63 | wind | 3 | 43200 | < th | dose dependent | rect. | 15 | 2 |
| 739 | 80.80 | radiation | 1 | 43200 | < th | dose independent | rect. | 24 | 5 |
| 744 | 80.81 | wind | 1 | 43200 | < th | dose independent | rect. | 15 | 3 |
| 745 | 80.81 | radiation | 20 | 43200 | < th | dose independent | rect. | 19 | 12 |
| 750 | 80.82 | radiation | 20 | 43200 | < th | dose independent | rect. | 2 | 5 |
| 779 | 80.88 | radiation | 20 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 800 | 80.91 | temperature | 20 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 805 | 80.91 | humidity | 80 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 815 | 80.92 | humidity | 50 | 43200 | > th | dose independent | rect. | 17 | 19 |
| 850 | 80.96 | humidity | 50 | 43200 | > th | dose independent | rect. | 16 | 21 |
| 877 | 80.99 | temperature | 20 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 927 | 81.04 | wind | 1 | 43200 | > th | dose independent | rect. | 14 | 4 |
| 978 | 81.07 | radiation | 40 | 43200 | < th | dose independent | rect. | 24 | 8 |