Os09g0255900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF247, plant family protein.
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Os09g0255900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF247, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 81.54 | 0.424 | 8.96 | 1.23 | 4 | 2.99 | -2.76 | -3.69 | 0.521 | 15.6 | 9.908 | 324 | 18.7 | 13 |
| 89.78 | 0.441 | 8.97 | 1.45 | 3.45 | 2.7 | -0.385 | -- | 0.468 | 15.4 | 14.08 | 313 | 18.5 | 13.3 |
| 84.62 | 0.428 | 8.94 | 1.46 | 4.12 | 3.06 | -- | -0.46 | 0.565 | 15.6 | 9.761 | 334 | 18.7 | 12.9 |
| 84.91 | 0.429 | 8.93 | 1.51 | 4.21 | 3.11 | -- | -- | 0.571 | 15.6 | 9.446 | 336 | 18.6 | 12.8 |
| 137.71 | 0.547 | 8.85 | 1.5 | -- | 1.73 | -- | 0.923 | 0.664 | -- | -20.53 | 1210 | 21.6 | 12.7 |
| 131.56 | 0.538 | 8.84 | 1.79 | 1.39 | -- | -0.446 | -- | 0.872 | 15.3 | -- | -- | -- | -- |
| 132.17 | 0.538 | 8.84 | 1.78 | 1.39 | -- | -- | -- | 0.869 | 15.4 | -- | -- | -- | -- |
| 122.49 | 0.515 | 8.91 | 1.52 | -- | 1.77 | -- | -- | 0.685 | -- | -5.37 | 1135 | 23.8 | 10.6 |
| 145.35 | 0.562 | 8.94 | -- | 4.21 | 3.34 | -- | -- | 0.51 | 15.5 | 9.758 | 339 | 18.4 | 13.2 |
| 240.65 | 0.725 | 8.84 | 1.72 | -- | -- | -- | -- | 0.833 | -- | -- | -- | -- | -- |
| 215.4 | 0.687 | 8.89 | -- | 1.35 | -- | -- | -- | 0.672 | 15.4 | -- | -- | -- | -- |
| 163.76 | 0.596 | 8.92 | -- | -- | 2.26 | -- | -- | 0.451 | -- | -14.22 | 2537 | 0.333 | 10.9 |
| 318.53 | 0.833 | 8.89 | -- | -- | -- | -- | -- | 0.642 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 86.14 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 19 | 13 |
| 10 | 91.76 | temperature | 30.0 | 10 | < th | dose dependent | sin | 8 | NA |
| 13 | 92.50 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 14 |
| 14 | 92.59 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 16 | 14 |
| 19 | 92.96 | temperature | 15.0 | 10 | > th | dose dependent | sin | 8 | NA |
| 23 | 93.27 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 17 | 12 |
| 32 | 93.64 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 22 | 6 |
| 40 | 94.01 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 14 | 16 |
| 43 | 94.24 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 23 | 4 |
| 53 | 94.79 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 11 | 17 |
| 81 | 95.75 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 12 | 18 |
| 109 | 96.23 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 116 | 96.33 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 10 | 3 |
| 123 | 96.48 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 10 | 3 |
| 127 | 96.50 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 2 |
| 136 | 96.62 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 20 | 5 |
| 138 | 96.66 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 159 | 96.88 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 2 | 8 |
| 163 | 96.90 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 2 | 8 |
| 166 | 96.94 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 4 | 6 |
| 171 | 96.99 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 24 | 10 |
| 173 | 97.00 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 2 | 8 |
| 180 | 97.03 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 4 | 6 |
| 186 | 97.09 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 4 | 6 |
| 205 | 97.24 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 21 | 13 |
| 224 | 97.41 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 21 | 13 |
| 278 | 97.86 | radiation | 30.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 303 | 98.01 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 339 | 98.26 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 357 | 98.37 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 377 | 98.50 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 20 | 5 |
| 381 | 98.54 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 22 | 7 |
| 386 | 98.58 | humidity | 60.0 | 43200 | < th | dose dependent | sin | 8 | NA |
| 397 | 98.63 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 5 |
| 412 | 98.72 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 446 | 98.79 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 21 | 4 |
| 498 | 98.97 | wind | 9.0 | 43200 | < th | dose independent | rect. | 9 | 7 |
| 501 | 98.98 | wind | 9.0 | 43200 | > th | dose independent | rect. | 9 | 7 |
| 503 | 98.99 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 530 | 99.08 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 8 | 3 |
| 544 | 99.08 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 8 | 3 |
| 556 | 99.12 | radiation | 30.0 | 43200 | < th | dose independent | sin | 3 | NA |
| 568 | 99.13 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 23 | 11 |
| 593 | 99.17 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 19 | 10 |
| 615 | 99.17 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 20 | 18 |
| 677 | 99.25 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 19 | 10 |
| 708 | 99.29 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 709 | 99.29 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 2 | 12 |
| 724 | 99.33 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 829 | 99.39 | radiation | 30.0 | 43200 | < th | dose independent | no | NA | NA |
| 830 | 99.39 | wind | 9.0 | 43200 | < th | dose independent | rect. | 10 | 4 |
| 899 | 99.47 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 12 |
| 905 | 99.48 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 8 | 6 |
| 938 | 99.51 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 8 | 3 |
| 943 | 99.51 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 8 | 3 |
| 962 | 99.54 | wind | 9.0 | 43200 | > th | dose independent | rect. | 10 | 4 |
| 979 | 99.57 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 995 | 99.60 | temperature | 20.0 | 270 | > th | dose independent | rect. | 19 | 14 |