Os09g0255000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cell wall invertase (EC 3.2.1.26).
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Os09g0255000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cell wall invertase (EC 3.2.1.26).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 73.89 | 0.404 | 9.81 | 0.98 | 0.47 | 0.285 | -1.68 | -8.21 | -0.388 | 22 | 30 | 849 | -- | -- |
| 87.96 | 0.44 | 9.96 | 0.0172 | 0.587 | -0.191 | -1.25 | -- | -0.526 | 22.1 | 30 | 849 | -- | -- |
| 83.06 | 0.424 | 9.81 | 1.12 | 0.551 | 0.321 | -- | -6.95 | -0.394 | 21.1 | 30 | 1043 | -- | -- |
| 86.85 | 0.434 | 9.94 | -0.0449 | 0.546 | -0.425 | -- | -- | -0.451 | 21.2 | 30.71 | 2776 | -- | -- |
| 97.56 | 0.46 | 9.82 | 0.844 | -- | 0.0105 | -- | -7 | -0.381 | -- | 29.9 | 828 | -- | -- |
| 89.33 | 0.443 | 9.96 | 0.0407 | 0.576 | -- | -1.24 | -- | -0.528 | 21.8 | -- | -- | -- | -- |
| 94.95 | 0.456 | 9.96 | 0.0909 | 0.592 | -- | -- | -- | -0.524 | 21.4 | -- | -- | -- | -- |
| 103.88 | 0.475 | 9.92 | -0.0427 | -- | -0.557 | -- | -- | -0.43 | -- | 32.65 | 4998 | -- | -- |
| 84.33 | 0.428 | 9.95 | -- | 0.571 | -0.553 | -- | -- | -0.47 | 21.5 | 32.7 | 6059 | -- | -- |
| 115.44 | 0.502 | 9.94 | 0.0943 | -- | -- | -- | -- | -0.526 | -- | -- | -- | -- | -- |
| 95.16 | 0.456 | 9.96 | -- | 0.592 | -- | -- | -- | -0.534 | 21.4 | -- | -- | -- | -- |
| 103.77 | 0.474 | 9.92 | -- | -- | -0.557 | -- | -- | -0.422 | -- | 32.5 | 4834 | -- | -- |
| 115.68 | 0.502 | 9.95 | -- | -- | -- | -- | -- | -0.536 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 73.88 | temperature | 30 | 720 | > th | dose independent | rect. | 13 | 5 |
| 31 | 74.13 | temperature | 30 | 720 | < th | dose independent | rect. | 12 | 8 |
| 47 | 74.21 | temperature | 30 | 720 | < th | dose independent | rect. | 13 | 6 |
| 49 | 74.25 | temperature | 30 | 720 | > th | dose independent | sin | 18 | NA |
| 51 | 74.29 | temperature | 30 | 720 | < th | dose independent | sin | 20 | NA |
| 61 | 74.51 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 16 |
| 63 | 74.53 | temperature | 30 | 720 | < th | dose independent | rect. | 15 | 6 |
| 80 | 74.64 | temperature | 30 | 720 | < th | dose independent | rect. | 3 | 23 |
| 81 | 74.64 | temperature | 30 | 720 | < th | dose independent | rect. | 12 | 23 |
| 85 | 74.69 | temperature | 25 | 90 | > th | dose dependent | rect. | 18 | 13 |
| 88 | 74.74 | temperature | 30 | 720 | > th | dose independent | rect. | 15 | 2 |
| 95 | 74.84 | temperature | 30 | 720 | < th | dose independent | rect. | 5 | 23 |
| 96 | 74.85 | temperature | 30 | 720 | < th | dose independent | rect. | 8 | 16 |
| 118 | 75.02 | temperature | 30 | 720 | < th | dose independent | no | NA | NA |
| 122 | 75.06 | temperature | 30 | 720 | < th | dose independent | rect. | 10 | 23 |
| 125 | 75.15 | temperature | 30 | 720 | > th | dose independent | no | NA | NA |
| 235 | 75.23 | humidity | 70 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 236 | 75.23 | temperature | 30 | 720 | < th | dose independent | rect. | 19 | 23 |
| 241 | 75.29 | temperature | 20 | 720 | > th | dose dependent | rect. | 4 | 5 |
| 248 | 75.36 | humidity | 70 | 270 | > th | dose independent | rect. | 17 | 10 |
| 251 | 75.38 | temperature | 20 | 720 | > th | dose dependent | rect. | 5 | 2 |
| 286 | 75.64 | humidity | 60 | 14400 | < th | dose independent | rect. | 16 | 2 |
| 290 | 75.70 | humidity | 60 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 298 | 75.78 | temperature | 30 | 720 | < th | dose independent | rect. | 8 | 23 |
| 304 | 75.81 | humidity | 60 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 306 | 75.81 | temperature | 30 | 720 | < th | dose independent | rect. | 15 | 14 |
| 307 | 75.82 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 23 |
| 315 | 75.88 | temperature | 25 | 270 | < th | dose independent | rect. | 7 | 7 |
| 317 | 75.89 | humidity | 80 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 320 | 75.91 | humidity | 60 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 347 | 76.05 | temperature | 30 | 720 | < th | dose independent | rect. | 1 | 23 |
| 370 | 76.20 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 372 | 76.20 | humidity | 60 | 14400 | > th | dose independent | rect. | 16 | 3 |
| 400 | 76.32 | temperature | 25 | 270 | < th | dose independent | rect. | 9 | 1 |
| 408 | 76.39 | humidity | 60 | 14400 | > th | dose independent | rect. | 16 | 14 |
| 409 | 76.40 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 1 |
| 410 | 76.40 | temperature | 25 | 270 | < th | dose independent | rect. | 8 | 3 |
| 419 | 76.42 | humidity | 60 | 14400 | > th | dose independent | rect. | 16 | 9 |
| 437 | 76.47 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 15 |
| 474 | 76.53 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 1 |
| 484 | 76.60 | humidity | 80 | 4320 | < th | dose dependent | rect. | 19 | 4 |
| 496 | 76.68 | temperature | 20 | 270 | > th | dose dependent | rect. | 4 | 14 |
| 497 | 76.69 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 6 |
| 501 | 76.70 | temperature | 25 | 720 | > th | dose dependent | rect. | 13 | 19 |
| 504 | 76.71 | temperature | 25 | 270 | > th | dose dependent | sin | 12 | NA |
| 532 | 76.82 | temperature | 30 | 270 | < th | dose independent | rect. | 17 | 10 |
| 549 | 76.90 | humidity | 60 | 14400 | < th | dose independent | sin | 14 | NA |
| 560 | 76.94 | humidity | 60 | 14400 | > th | dose independent | sin | 14 | NA |
| 575 | 76.96 | humidity | 60 | 720 | < th | dose independent | rect. | 14 | 1 |
| 576 | 76.96 | humidity | 70 | 720 | < th | dose dependent | rect. | 14 | 3 |
| 585 | 76.98 | humidity | 60 | 14400 | < th | dose independent | rect. | 12 | 6 |
| 586 | 76.98 | temperature | 25 | 720 | > th | dose dependent | sin | 16 | NA |
| 589 | 76.99 | humidity | 80 | 4320 | < th | dose independent | rect. | 19 | 4 |
| 613 | 77.02 | humidity | 60 | 14400 | > th | dose independent | rect. | 12 | 6 |
| 642 | 77.05 | humidity | 60 | 14400 | > th | dose independent | rect. | 12 | 12 |
| 666 | 77.08 | radiation | 20 | 1440 | > th | dose dependent | rect. | 16 | 16 |
| 709 | 77.13 | temperature | 25 | 720 | > th | dose dependent | rect. | 13 | 8 |
| 749 | 77.18 | temperature | 30 | 720 | > th | dose dependent | rect. | 13 | 5 |
| 783 | 77.22 | humidity | 60 | 720 | < th | dose independent | rect. | 12 | 5 |
| 793 | 77.23 | humidity | 80 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 854 | 77.29 | radiation | 20 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 875 | 77.30 | humidity | 70 | 14400 | < th | dose dependent | sin | 13 | NA |
| 881 | 77.31 | humidity | 60 | 720 | > th | dose independent | rect. | 15 | 6 |
| 903 | 77.33 | humidity | 60 | 720 | > th | dose independent | rect. | 13 | 8 |
| 921 | 77.35 | humidity | 60 | 720 | > th | dose independent | rect. | 11 | 10 |
| 924 | 77.35 | humidity | 70 | 720 | < th | dose dependent | rect. | 12 | 6 |
| 955 | 77.38 | humidity | 80 | 4320 | < th | dose dependent | rect. | 19 | 1 |