Os09g0253100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os09g0253100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 343.31 | 0.871 | 4 | 1.97 | 0.374 | 1.94 | 0.0997 | -1.16 | 0.0852 | 8.76 | 24.3 | 4393 | -- | -- |
| 339.48 | 0.858 | 4.02 | 1.67 | 0.383 | 1.79 | 0.191 | -- | 0.0945 | 8.62 | 23.6 | 4884 | -- | -- |
| 339.03 | 0.858 | 4.01 | 1.74 | 0.351 | 1.79 | -- | -0.447 | 0.105 | 9.26 | 23.79 | 4747 | -- | -- |
| 338.85 | 0.857 | 4.03 | 1.66 | 0.324 | 1.72 | -- | -- | 0.0676 | 9.27 | 23.69 | 4879 | -- | -- |
| 344.69 | 0.865 | 4.01 | 1.82 | -- | 1.76 | -- | -0.419 | 0.127 | -- | 23.66 | 4965 | -- | -- |
| 445.16 | 0.989 | 4.16 | 0.807 | 0.392 | -- | -0.046 | -- | -0.509 | 10.2 | -- | -- | -- | -- |
| 445.17 | 0.988 | 4.16 | 0.806 | 0.392 | -- | -- | -- | -0.51 | 10.1 | -- | -- | -- | -- |
| 344.83 | 0.865 | 4.03 | 1.68 | -- | 1.75 | -- | -- | 0.0788 | -- | 23.68 | 4965 | -- | -- |
| 405.99 | 0.938 | 4.09 | -- | 0.341 | 1.5 | -- | -- | -0.262 | 8.15 | 24.6 | 4358 | -- | -- |
| 454.47 | 0.996 | 4.17 | 0.8 | -- | -- | -- | -- | -0.51 | -- | -- | -- | -- | -- |
| 462.27 | 1.01 | 4.18 | -- | 0.389 | -- | -- | -- | -0.599 | 9.97 | -- | -- | -- | -- |
| 393.62 | 0.924 | 4.05 | -- | -- | 1.34 | -- | -- | 0.00031 | -- | 23.3 | 2109 | -- | -- |
| 471.36 | 1.01 | 4.19 | -- | -- | -- | -- | -- | -0.599 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 335.10 | temperature | 20 | 4320 | > th | dose dependent | rect. | 19 | 2 |
| 10 | 336.07 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 7 |
| 22 | 337.07 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 16 |
| 27 | 337.29 | temperature | 20 | 720 | > th | dose dependent | rect. | 18 | 18 |
| 30 | 337.33 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 18 |
| 31 | 337.34 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 32 | 337.37 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 35 | 337.49 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 41 | 337.70 | temperature | 20 | 4320 | > th | dose dependent | rect. | 17 | 11 |
| 61 | 338.21 | wind | 5 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 68 | 338.32 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 21 |
| 76 | 338.51 | temperature | 10 | 4320 | > th | dose dependent | rect. | 20 | 2 |
| 80 | 338.59 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 86 | 338.63 | temperature | 20 | 1440 | > th | dose dependent | sin | 10 | NA |
| 99 | 338.79 | wind | 9 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 139 | 339.16 | wind | 9 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 275 | 340.66 | temperature | 20 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 339 | 341.18 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 5 |
| 367 | 341.36 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 6 |
| 430 | 341.82 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 602 | 342.73 | temperature | 25 | 4320 | < th | dose independent | rect. | 17 | 5 |
| 619 | 342.77 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 12 |
| 624 | 342.79 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 656 | 342.94 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 21 |
| 663 | 342.99 | temperature | 10 | 1440 | > th | dose dependent | sin | 8 | NA |
| 673 | 343.02 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 739 | 343.25 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 3 |
| 782 | 343.42 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 3 |
| 784 | 343.42 | radiation | 1 | 43200 | < th | dose dependent | rect. | 20 | 4 |
| 787 | 343.44 | temperature | 25 | 4320 | > th | dose independent | rect. | 17 | 6 |
| 836 | 343.58 | temperature | 30 | 1440 | < th | dose dependent | sin | 10 | NA |
| 839 | 343.60 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 1 |