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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os09g0247600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Lipolytic enzyme, G-D-S-L family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.01 (0.0157) R2 : 0.000973
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.022 (0.033) R2dN8 : 0.00126 R2N8 : 0.000973
σ : 0.295
deviance : 39.96
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
37.96 0.289 3 0.0993 0.0243 -0.164 0.185 2.2 0.0344 11.6 0.1162 9 -- --
39.12 0.291 3.01 0.0876 0.0206 0.308 0.0953 -- 0.0394 11.5 0.09973 8 -- --
38.08 0.287 3 0.112 0.0305 -0.165 -- 2.08 0.0347 9.89 0.002125 8 -- --
39.16 0.291 3.01 0.0922 0.0218 0.292 -- -- 0.0394 9.86 0.07656 8 -- --
38.13 0.288 3 0.107 -- -0.168 -- 2.06 0.0347 -- 0.04314 8 -- --
39.62 0.295 3.01 0.107 0.0251 -- 0.00978 -- 0.0335 7.03 -- -- -- --
39.62 0.295 3.01 0.107 0.0253 -- -- -- 0.0334 6.82 -- -- -- --
39.19 0.292 3.01 0.0922 -- 0.287 -- -- 0.0393 -- 0.06054 8 -- --
39.38 0.292 3.01 -- 0.0218 0.314 -- -- 0.0298 9.8 0.01679 8 -- --
39.65 0.294 3.01 0.108 -- -- -- -- 0.0339 -- -- -- -- --
39.92 0.296 3.01 -- 0.0266 -- -- -- 0.0215 6.58 -- -- -- --
39.41 0.292 3.01 -- -- 0.31 -- -- 0.0297 -- 0.05328 8 -- --
39.96 0.295 3.01 -- -- -- -- -- 0.022 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 37.12 wind 1.0 30 < th dose independent rect. 21 3
25 37.20 wind 1.0 30 < th dose independent rect. 14 10
30 37.21 wind 1.0 30 < th dose dependent rect. 22 2
79 37.46 wind 1.0 30 > th dose independent sin 15 NA
88 37.52 wind 1.0 30 < th dose independent sin 15 NA
140 37.62 humidity 90.0 90 > th dose dependent rect. 18 7
144 37.63 wind 1.0 1440 < th dose dependent rect. 23 1
148 37.63 humidity 90.0 30 > th dose dependent rect. 19 5
158 37.64 wind 1.0 30 > th dose independent rect. 14 16
185 37.68 wind 1.0 30 < th dose independent rect. 9 17
206 37.71 humidity 90.0 90 > th dose dependent rect. 13 12
212 37.71 wind 1.0 10 < th dose dependent rect. 6 18
225 37.73 wind 1.0 10 < th dose dependent sin 17 NA
238 37.74 wind 1.0 30 < th dose dependent sin 15 NA
266 37.76 temperature 20.0 10 > th dose independent rect. 6 1
306 37.78 atmosphere 1015.0 720 < th dose independent rect. 19 2
308 37.78 temperature 20.0 10 > th dose dependent rect. 6 1
310 37.79 wind 1.0 1440 < th dose independent rect. 23 1
329 37.81 wind 3.0 30 < th dose independent rect. 6 1
333 37.81 temperature 10.0 30 > th dose independent rect. 6 1
335 37.81 temperature 30.0 30 < th dose independent rect. 6 1
336 37.81 humidity 50.0 30 > th dose independent rect. 6 1
340 37.81 atmosphere 995.0 30 > th dose independent rect. 6 1
341 37.81 atmosphere 1005.0 30 > th dose independent rect. 6 1
342 37.81 atmosphere 1015.0 30 < th dose independent rect. 6 1
343 37.81 radiation 20.0 30 < th dose independent rect. 6 1
346 37.81 precipitation 0.1 30 < th dose independent rect. 6 1
348 37.81 temperature 10.0 30 > th dose independent rect. 7 23
350 37.81 wind 7.0 30 < th dose dependent rect. 6 1
352 37.81 radiation 40.0 30 < th dose dependent rect. 6 1
353 37.81 precipitation 0.1 30 < th dose dependent rect. 6 1
361 37.82 wind 9.0 1440 < th dose independent rect. 7 1
363 37.82 temperature 10.0 1440 > th dose independent rect. 7 1
367 37.82 temperature 30.0 1440 < th dose independent rect. 7 1
371 37.82 humidity 50.0 1440 > th dose independent rect. 7 1
376 37.82 atmosphere 995.0 1440 > th dose independent rect. 7 1
377 37.82 atmosphere 1015.0 1440 < th dose independent rect. 7 1
378 37.82 radiation 1.0 30 > th dose independent rect. 6 1
381 37.82 temperature 10.0 1440 > th dose independent rect. 8 23
386 37.82 humidity 50.0 30 > th dose dependent rect. 6 1
397 37.83 humidity 90.0 30 < th dose independent rect. 6 1
399 37.83 wind 1.0 30 < th dose independent rect. 6 20
401 37.83 atmosphere 995.0 30 > th dose dependent rect. 6 1
402 37.83 atmosphere 1015.0 30 < th dose dependent rect. 6 1
410 37.84 wind 1.0 30 > th dose independent rect. 6 1
418 37.84 radiation 1.0 10 > th dose dependent rect. 6 1
420 37.85 wind 1.0 720 > th dose independent rect. 19 2
428 37.85 precipitation 0.1 30 < th dose independent rect. 7 13
432 37.85 humidity 90.0 30 > th dose dependent sin 18 NA
449 37.85 precipitation 0.1 30 < th dose dependent rect. 7 13
483 37.87 wind 9.0 30 < th dose independent rect. 7 23
503 37.88 wind 7.0 720 < th dose independent rect. 19 2
509 37.88 humidity 90.0 30 < th dose dependent rect. 6 1
567 37.91 temperature 10.0 720 > th dose independent rect. 19 2
568 37.91 temperature 30.0 720 < th dose independent rect. 19 2
569 37.91 humidity 50.0 720 > th dose independent rect. 19 2
570 37.91 atmosphere 995.0 720 > th dose independent rect. 19 2
571 37.91 radiation 1.0 720 < th dose independent rect. 19 2
576 37.91 precipitation 0.1 720 < th dose independent rect. 7 2
578 37.91 temperature 10.0 720 > th dose independent rect. 21 22
581 37.91 radiation 1.0 720 < th dose dependent rect. 19 2
586 37.91 precipitation 0.1 720 < th dose dependent rect. 7 2
619 37.93 wind 1.0 90 > th dose independent rect. 19 12
642 37.94 temperature 30.0 30 < th dose dependent rect. 6 1
659 37.95 wind 1.0 30 > th dose dependent rect. 6 1
671 37.96 wind 1.0 720 > th dose independent rect. 7 2
685 37.97 precipitation 0.1 4320 < th dose independent rect. 8 2
689 37.97 wind 9.0 720 < th dose independent rect. 11 8
697 37.97 precipitation 0.1 4320 < th dose dependent rect. 8 2
713 37.98 atmosphere 1015.0 30 < th dose independent rect. 20 11
731 37.99 wind 5.0 30 < th dose independent rect. 20 11
733 37.99 precipitation 0.1 30 < th dose independent rect. 7 23
739 37.99 precipitation 0.1 30 < th dose dependent rect. 7 23
744 38.00 wind 1.0 30 > th dose independent rect. 23 23
760 38.02 humidity 70.0 90 > th dose independent rect. 19 12
772 38.03 precipitation 0.1 720 < th dose independent rect. 19 2
775 38.03 wind 9.0 90 < th dose independent rect. 7 12
781 38.03 atmosphere 1015.0 10 < th dose independent rect. 20 18
783 38.03 precipitation 0.1 720 < th dose dependent rect. 19 2
785 38.04 wind 1.0 1440 > th dose independent rect. 23 1
788 38.04 precipitation 0.1 30 < th dose independent rect. 14 6
798 38.04 precipitation 0.1 90 < th dose independent rect. 15 14
805 38.04 precipitation 0.1 30 < th dose dependent rect. 14 6
806 38.04 precipitation 0.1 90 < th dose dependent rect. 15 14
836 38.06 wind 1.0 10 < th dose dependent rect. 2 23
857 38.08 wind 9.0 720 < th dose independent rect. 7 16
858 38.08 precipitation 0.1 720 < th dose independent rect. 21 22
862 38.08 precipitation 0.1 720 < th dose dependent rect. 21 22
863 38.09 temperature 10.0 1440 > th dose independent rect. 21 11
866 38.09 temperature 30.0 1440 < th dose independent rect. 21 11
870 38.09 humidity 50.0 1440 > th dose independent rect. 21 11
875 38.09 atmosphere 995.0 1440 > th dose independent rect. 21 11
877 38.09 temperature 10.0 1440 > th dose independent rect. 8 13
886 38.10 wind 1.0 30 < th dose independent rect. 23 11
887 38.10 precipitation 0.1 30 < th dose independent rect. 20 11
888 38.10 temperature 10.0 90 > th dose independent rect. 7 12
889 38.10 temperature 10.0 90 > th dose independent rect. 19 12
890 38.10 temperature 30.0 90 < th dose independent rect. 19 12
891 38.10 humidity 50.0 90 > th dose independent rect. 19 12
893 38.10 atmosphere 995.0 90 > th dose independent rect. 19 12
894 38.10 atmosphere 1015.0 90 < th dose independent rect. 7 12
895 38.10 radiation 40.0 90 < th dose independent rect. 19 12
897 38.10 wind 1.0 30 < th dose independent rect. 21 13
909 38.10 precipitation 0.1 30 < th dose dependent rect. 20 11
914 38.11 radiation 1.0 720 > th dose independent rect. 7 2
945 38.11 wind 9.0 720 < th dose dependent rect. 19 2