Os09g0246500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0246500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 147.65 | 0.571 | 3.87 | 0.756 | 0.859 | 0.981 | -0.606 | 2.81 | 0.509 | 21.4 | 20.95 | 1775 | -- | -- |
| 164.51 | 0.597 | 3.95 | 0.413 | 0.69 | 0.637 | -0.667 | -- | 0.427 | 20.7 | 22.1 | 852 | -- | -- |
| 147.99 | 0.567 | 3.87 | 0.872 | 0.884 | 0.939 | -- | 2.93 | 0.526 | 21.3 | 21.1 | 1586 | -- | -- |
| 163.07 | 0.595 | 3.96 | 0.26 | 0.764 | 0.575 | -- | -- | 0.377 | 21.1 | 22 | 837 | -- | -- |
| 188.88 | 0.64 | 3.86 | 0.842 | -- | 1.02 | -- | 2.88 | 0.478 | -- | 21.47 | 2097 | -- | -- |
| 176.54 | 0.623 | 3.93 | 0.448 | 0.883 | -- | -0.489 | -- | 0.55 | 21.3 | -- | -- | -- | -- |
| 177.39 | 0.624 | 3.93 | 0.466 | 0.887 | -- | -- | -- | 0.551 | 21.3 | -- | -- | -- | -- |
| 195.82 | 0.652 | 3.96 | 0.199 | -- | 0.794 | -- | -- | 0.296 | -- | 21.97 | 780 | -- | -- |
| 164.47 | 0.597 | 3.97 | -- | 0.762 | 0.673 | -- | -- | 0.336 | 21.1 | 21.7 | 867 | -- | -- |
| 223.13 | 0.698 | 3.9 | 0.47 | -- | -- | -- | -- | 0.547 | -- | -- | -- | -- | -- |
| 183.11 | 0.633 | 3.94 | -- | 0.887 | -- | -- | -- | 0.499 | 21.3 | -- | -- | -- | -- |
| 196.53 | 0.653 | 3.96 | -- | -- | 0.863 | -- | -- | 0.269 | -- | 21.73 | 824 | -- | -- |
| 228.95 | 0.706 | 3.91 | -- | -- | -- | -- | -- | 0.495 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 144.22 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 3 | 145.44 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 3 |
| 5 | 145.49 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 21 | 10 |
| 11 | 146.13 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 4 | 1 |
| 14 | 146.22 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 16 | 146.23 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 21 | 6 |
| 26 | 146.55 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 9 |
| 36 | 146.84 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 6 |
| 42 | 146.92 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 46 | 146.97 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 47 | 146.98 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 54 | 147.17 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 57 | 147.21 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 63 | 147.29 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 9 |
| 74 | 147.43 | wind | 3.0 | 14400 | < th | dose dependent | sin | 9 | NA |
| 127 | 148.18 | wind | 3.0 | 14400 | < th | dose independent | rect. | 23 | 4 |
| 136 | 148.22 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 4 |
| 146 | 148.34 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 8 |
| 148 | 148.35 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 150 | 148.37 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 4 |
| 206 | 149.03 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 12 | 18 |
| 211 | 149.05 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 220 | 149.12 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 14 |
| 231 | 149.20 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 233 | 149.20 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 245 | 149.29 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 9 |
| 246 | 149.30 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 248 | 149.30 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 250 | 149.32 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 14 |
| 287 | 149.51 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 9 |
| 300 | 149.57 | wind | 3.0 | 14400 | > th | dose independent | rect. | 23 | 4 |
| 308 | 149.60 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 9 |
| 350 | 149.82 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 363 | 149.89 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 374 | 149.94 | wind | 3.0 | 14400 | < th | dose independent | sin | 8 | NA |
| 400 | 150.05 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 447 | 150.34 | temperature | 20.0 | 1440 | > th | dose independent | sin | 5 | NA |
| 468 | 150.45 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 513 | 150.62 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 517 | 150.64 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 1 | 2 |
| 519 | 150.65 | wind | 3.0 | 14400 | > th | dose independent | sin | 8 | NA |
| 563 | 150.77 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 21 | 10 |
| 579 | 150.83 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 612 | 150.94 | temperature | 20.0 | 1440 | < th | dose independent | sin | 4 | NA |
| 626 | 150.97 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 629 | 150.98 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 644 | 151.03 | temperature | 25.0 | 720 | < th | dose dependent | sin | 14 | NA |
| 664 | 151.10 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 3 |
| 677 | 151.15 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 18 | 13 |
| 685 | 151.18 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 687 | 151.18 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 696 | 151.23 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 699 | 151.24 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 13 | 18 |
| 715 | 151.30 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 717 | 151.30 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 9 | 22 |
| 729 | 151.35 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 21 | 20 |
| 751 | 151.39 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 755 | 151.41 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 21 | 10 |
| 765 | 151.43 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 21 | 15 |
| 833 | 151.57 | wind | 1.0 | 14400 | > th | dose independent | rect. | 19 | 18 |
| 852 | 151.60 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 1 | 11 |
| 882 | 151.69 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 8 | 2 |
| 923 | 151.80 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 18 | 23 |
| 924 | 151.80 | humidity | 70.0 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 931 | 151.82 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 18 | 18 |
| 965 | 151.88 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 13 | 18 |
| 995 | 151.95 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 9 | 22 |