Os09g0245500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Flavonol synthase-like protein.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0245500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Flavonol synthase-like protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 41.15 | 0.301 | 9.65 | 0.0211 | 0.794 | -0.799 | -0.279 | 3.05 | -0.117 | 21.7 | 27.2 | 4751 | -- | -- |
| 44.64 | 0.311 | 9.56 | 0.798 | 0.835 | -0.573 | -0.185 | -- | 0.00417 | 21.5 | 23.58 | 4648 | -- | -- |
| 41.44 | 0.3 | 9.65 | 0.0321 | 0.798 | -0.799 | -- | 3.07 | -0.116 | 21.6 | 27.2 | 4726 | -- | -- |
| 43.66 | 0.308 | 9.57 | 0.794 | 0.827 | -0.571 | -- | -- | -0.0529 | 21.3 | 22.9 | 4217 | -- | -- |
| 77 | 0.409 | 9.62 | 0.0622 | -- | -0.883 | -- | 2.83 | -0.114 | -- | 27.1 | 5048 | -- | -- |
| 55.69 | 0.35 | 9.52 | 1.06 | 0.827 | -- | -0.242 | -- | 0.165 | 21.5 | -- | -- | -- | -- |
| 55.91 | 0.35 | 9.52 | 1.07 | 0.829 | -- | -- | -- | 0.165 | 21.5 | -- | -- | -- | -- |
| 67.03 | 0.381 | 9.55 | 0.856 | -- | -0.829 | -- | -- | -0.0702 | -- | 25.8 | 745 | -- | -- |
| 47.04 | 0.319 | 9.59 | -- | 0.796 | -0.812 | -- | -- | -0.115 | 21.2 | 18.9 | 29725 | -- | -- |
| 96.27 | 0.458 | 9.5 | 1.07 | -- | -- | -- | -- | 0.163 | -- | -- | -- | -- | -- |
| 86.04 | 0.434 | 9.55 | -- | 0.83 | -- | -- | -- | 0.0463 | 21.6 | -- | -- | -- | -- |
| 84.06 | 0.427 | 9.6 | -- | -- | -1.04 | -- | -- | -0.225 | -- | 18.9 | 28230 | -- | -- |
| 126.73 | 0.525 | 9.53 | -- | -- | -- | -- | -- | 0.0437 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 35.46 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 8 |
| 2 | 35.54 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 7 | 36.07 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 13 |
| 13 | 36.21 | temperature | 20 | 720 | > th | dose dependent | sin | 8 | NA |
| 43 | 37.82 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 47 | 38.07 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 3 |
| 53 | 38.17 | radiation | 40 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 55 | 38.21 | radiation | 40 | 14400 | < th | dose independent | rect. | 17 | 15 |
| 61 | 38.26 | radiation | 10 | 1440 | < th | dose independent | rect. | 16 | 15 |
| 62 | 38.27 | radiation | 40 | 14400 | < th | dose independent | rect. | 2 | 6 |
| 84 | 38.76 | temperature | 20 | 720 | > th | dose independent | rect. | 4 | 2 |
| 105 | 39.14 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 2 |
| 106 | 39.15 | temperature | 15 | 43200 | < th | dose independent | rect. | 23 | 2 |
| 109 | 39.17 | temperature | 15 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 112 | 39.18 | temperature | 15 | 43200 | < th | dose independent | rect. | 18 | 8 |
| 113 | 39.18 | temperature | 15 | 43200 | > th | dose independent | rect. | 17 | 9 |
| 114 | 39.19 | temperature | 15 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 121 | 39.20 | temperature | 15 | 43200 | > th | dose independent | rect. | 13 | 15 |
| 140 | 39.24 | temperature | 15 | 43200 | < th | dose independent | rect. | 13 | 15 |
| 144 | 39.25 | temperature | 15 | 43200 | > th | dose independent | rect. | 22 | 4 |
| 177 | 39.30 | temperature | 15 | 43200 | > th | dose independent | sin | 15 | NA |
| 178 | 39.30 | temperature | 15 | 43200 | < th | dose independent | sin | 14 | NA |
| 271 | 39.39 | temperature | 25 | 720 | < th | dose dependent | rect. | 2 | 4 |
| 433 | 39.56 | temperature | 15 | 43200 | < th | dose independent | rect. | 18 | 21 |
| 449 | 39.57 | temperature | 25 | 720 | < th | dose dependent | rect. | 23 | 8 |
| 469 | 39.59 | temperature | 15 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 481 | 39.59 | temperature | 15 | 43200 | < th | dose independent | rect. | 22 | 23 |
| 493 | 39.60 | temperature | 15 | 43200 | < th | dose independent | rect. | 5 | 23 |
| 501 | 39.61 | temperature | 15 | 43200 | < th | dose independent | no | NA | NA |
| 513 | 39.61 | temperature | 15 | 43200 | > th | dose independent | rect. | 17 | 22 |
| 517 | 39.61 | temperature | 15 | 43200 | > th | dose independent | rect. | 22 | 23 |
| 539 | 39.63 | temperature | 15 | 43200 | > th | dose independent | no | NA | NA |
| 558 | 39.63 | temperature | 15 | 43200 | < th | dose independent | rect. | 3 | 23 |
| 565 | 39.64 | temperature | 15 | 43200 | < th | dose independent | rect. | 22 | 17 |
| 580 | 39.64 | humidity | 80 | 43200 | > th | dose dependent | rect. | 2 | 13 |
| 595 | 39.65 | temperature | 15 | 43200 | > th | dose independent | rect. | 3 | 23 |
| 619 | 39.67 | temperature | 15 | 43200 | > th | dose independent | rect. | 22 | 10 |
| 632 | 39.67 | temperature | 15 | 43200 | < th | dose dependent | rect. | 12 | 17 |
| 730 | 39.74 | temperature | 15 | 43200 | > th | dose independent | rect. | 22 | 18 |
| 767 | 39.76 | temperature | 15 | 43200 | < th | dose dependent | rect. | 2 | 6 |
| 782 | 39.77 | temperature | 15 | 43200 | < th | dose dependent | rect. | 1 | 19 |
| 787 | 39.78 | temperature | 15 | 43200 | > th | dose independent | rect. | 13 | 2 |
| 790 | 39.78 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 16 | 4 |
| 796 | 39.78 | temperature | 15 | 43200 | < th | dose dependent | sin | 15 | NA |
| 802 | 39.78 | temperature | 15 | 43200 | < th | dose dependent | rect. | 1 | 14 |
| 843 | 39.80 | temperature | 15 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 891 | 39.81 | temperature | 15 | 43200 | < th | dose dependent | rect. | 18 | 21 |
| 908 | 39.82 | temperature | 15 | 43200 | < th | dose dependent | no | NA | NA |
| 982 | 39.85 | temperature | 15 | 43200 | < th | dose dependent | sin | 6 | NA |