Os09g0244200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0244200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 271.33 | 0.774 | 3.57 | 1.23 | 0.912 | -1.26 | 0.477 | -2.06 | 1.16 | 20.2 | 1.14 | 1488 | -- | -- |
| 272.92 | 0.769 | 3.54 | 1.48 | 0.9 | -1.11 | 0.706 | -- | 1.23 | 20.1 | 1.805 | 1512 | -- | -- |
| 271.97 | 0.768 | 3.57 | 1.2 | 0.908 | -1.26 | -- | -2.22 | 1.15 | 20.2 | 1.152 | 1491 | -- | -- |
| 274.66 | 0.772 | 3.54 | 1.43 | 0.897 | -1.1 | -- | -- | 1.24 | 20.2 | 1.8 | 1509 | -- | -- |
| 307.91 | 0.822 | 3.55 | 1.29 | -- | -0.597 | -- | 0.189 | 1.08 | -- | 1.152 | 1491 | -- | -- |
| 288.38 | 0.796 | 3.58 | 1.3 | 1.02 | -- | 0.61 | -- | 1.07 | 20.7 | -- | -- | -- | -- |
| 289.6 | 0.797 | 3.58 | 1.28 | 1.02 | -- | -- | -- | 1.07 | 20.7 | -- | -- | -- | -- |
| 308.14 | 0.821 | 3.55 | 1.28 | -- | -0.596 | -- | -- | 1.08 | -- | 1.152 | 1491 | -- | -- |
| 321.4 | 0.835 | 3.58 | -- | 1.07 | -0.803 | -- | -- | 1.03 | 19.7 | 7.8 | 1781 | -- | -- |
| 347.96 | 0.872 | 3.55 | 1.28 | -- | -- | -- | -- | 1.06 | -- | -- | -- | -- | -- |
| 332.62 | 0.853 | 3.61 | -- | 1.01 | -- | -- | -- | 0.931 | 20.8 | -- | -- | -- | -- |
| 351.63 | 0.876 | 3.58 | -- | -- | -0.592 | -- | -- | 0.938 | -- | 1.152 | 1491 | -- | -- |
| 390.89 | 0.923 | 3.58 | -- | -- | -- | -- | -- | 0.923 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 256.36 | radiation | 1.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 3 | 259.21 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 5 | 264.70 | radiation | 1.0 | 10 | < th | dose independent | rect. | 5 | 11 |
| 8 | 265.13 | wind | 3.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 10 | 265.19 | wind | 5.0 | 90 | > th | dose dependent | rect. | 4 | 3 |
| 11 | 265.32 | wind | 3.0 | 10 | > th | dose dependent | rect. | 4 | 3 |
| 14 | 265.61 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 4 | 4 |
| 30 | 265.63 | wind | 5.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 31 | 265.63 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 4 | 4 |
| 45 | 265.73 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 4 | 1 |
| 46 | 265.73 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 4 | 2 |
| 50 | 265.73 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 51 | 265.73 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 4 | 2 |
| 55 | 265.74 | wind | 3.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 67 | 265.82 | wind | 3.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 68 | 265.92 | wind | 3.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 122 | 266.10 | wind | 3.0 | 10 | > th | dose independent | rect. | 4 | 3 |
| 138 | 267.36 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 24 | 7 |
| 142 | 267.56 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 24 | 7 |
| 155 | 267.94 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 158 | 267.98 | precipitation | 0.1 | 90 | > th | dose independent | sin | 6 | NA |
| 169 | 268.23 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 5 | 11 |
| 172 | 268.39 | temperature | 20.0 | 10 | > th | dose independent | rect. | 5 | 1 |
| 189 | 268.66 | precipitation | 0.1 | 90 | > th | dose dependent | sin | 6 | NA |
| 203 | 268.88 | precipitation | 0.1 | 90 | < th | dose independent | sin | 5 | NA |
| 207 | 268.88 | precipitation | 0.1 | 90 | < th | dose dependent | sin | 5 | NA |
| 242 | 269.53 | precipitation | 0.1 | 10 | > th | dose independent | sin | 2 | NA |
| 246 | 269.60 | precipitation | 0.1 | 10 | > th | dose dependent | sin | 2 | NA |
| 257 | 269.72 | radiation | 30.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 304 | 270.22 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 4 |
| 307 | 270.32 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 4 |
| 314 | 270.41 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 316 | 270.48 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 335 | 270.74 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 341 | 270.83 | wind | 1.0 | 43200 | > th | dose independent | rect. | 3 | 2 |
| 351 | 270.94 | radiation | 1.0 | 90 | < th | dose independent | rect. | 5 | 23 |
| 352 | 270.95 | wind | 1.0 | 43200 | < th | dose independent | rect. | 3 | 3 |
| 372 | 271.16 | precipitation | 0.1 | 10 | < th | dose independent | sin | 3 | NA |
| 374 | 271.16 | precipitation | 0.1 | 10 | < th | dose dependent | sin | 3 | NA |
| 410 | 271.40 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 413 | 271.43 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 7 | 10 |
| 418 | 271.48 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 2 |
| 419 | 271.48 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 2 |
| 423 | 271.52 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 18 | 23 |
| 426 | 271.54 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 18 | 23 |
| 465 | 271.76 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 466 | 271.76 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 472 | 271.79 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 24 | 5 |
| 475 | 271.80 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 2 |
| 503 | 271.99 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 7 | 10 |
| 513 | 272.04 | radiation | 40.0 | 1440 | > th | dose independent | rect. | 14 | 19 |
| 519 | 272.08 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 522 | 272.09 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 7 | 10 |
| 523 | 272.09 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 7 | 10 |
| 527 | 272.12 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 5 | 12 |
| 536 | 272.16 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 22 | 19 |
| 538 | 272.16 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 541 | 272.17 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 14 | 19 |
| 545 | 272.20 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 5 | 12 |
| 548 | 272.22 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 5 | 12 |
| 570 | 272.30 | wind | 3.0 | 10 | > th | dose independent | rect. | 2 | 5 |
| 575 | 272.37 | radiation | 40.0 | 1440 | > th | dose independent | rect. | 14 | 1 |
| 581 | 272.41 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 19 | 22 |
| 582 | 272.42 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 1 | 2 |
| 583 | 272.43 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 2 | 6 |
| 586 | 272.43 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 22 | 19 |
| 596 | 272.46 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 597 | 272.46 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 9 | 8 |
| 606 | 272.49 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 14 | 1 |
| 607 | 272.49 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 11 | 2 |
| 609 | 272.49 | radiation | 1.0 | 270 | > th | dose independent | rect. | 9 | 22 |
| 610 | 272.49 | radiation | 40.0 | 1440 | > th | dose dependent | rect. | 14 | 19 |
| 612 | 272.51 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 613 | 272.51 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 616 | 272.52 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 15 |
| 617 | 272.52 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 15 |
| 624 | 272.53 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 22 | 17 |
| 628 | 272.55 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 5 | 15 |
| 632 | 272.57 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 9 | 8 |
| 635 | 272.57 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 9 | 8 |
| 657 | 272.72 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 14 |
| 667 | 272.76 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 671 | 272.78 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 672 | 272.78 | radiation | 40.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 678 | 272.80 | wind | 5.0 | 270 | > th | dose dependent | rect. | 2 | 1 |
| 697 | 272.83 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 700 | 272.84 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 22 | 17 |
| 702 | 272.85 | radiation | 30.0 | 1440 | > th | dose dependent | rect. | 14 | 2 |
| 728 | 272.90 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 18 | 3 |
| 729 | 272.91 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 738 | 272.95 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 22 | 17 |
| 740 | 272.95 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 22 | 17 |
| 743 | 272.96 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 756 | 273.00 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 832 | 273.15 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 14 | 15 |
| 833 | 273.16 | radiation | 1.0 | 1440 | > th | dose independent | sin | 2 | NA |
| 840 | 273.18 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 14 | 3 |
| 867 | 273.20 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 871 | 273.21 | radiation | 1.0 | 30 | > th | dose independent | rect. | 11 | 23 |
| 903 | 273.24 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 14 | 10 |
| 904 | 273.24 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 14 | 12 |
| 910 | 273.25 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 14 | 17 |
| 912 | 273.26 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 915 | 273.26 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 14 | 7 |
| 919 | 273.27 | radiation | 1.0 | 90 | < th | dose independent | rect. | 14 | 1 |
| 921 | 273.27 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 924 | 273.28 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 942 | 273.30 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 956 | 273.34 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 14 | 4 |
| 962 | 273.35 | precipitation | 0.1 | 43200 | > th | dose independent | sin | 0 | NA |
| 968 | 273.37 | precipitation | 0.1 | 43200 | < th | dose independent | sin | 0 | NA |
| 972 | 273.37 | precipitation | 0.1 | 43200 | < th | dose dependent | sin | 0 | NA |
| 978 | 273.39 | wind | 9.0 | 4320 | > th | dose independent | rect. | 18 | 3 |
| 999 | 273.43 | radiation | 1.0 | 1440 | < th | dose independent | sin | 2 | NA |