Os09g0244100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0244100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 286.44 | 0.795 | 3.03 | -0.155 | 0.102 | -0.362 | 0.586 | -1.53 | -0.159 | 12.9 | 1015 | 7955 | -- | -- |
| 292.29 | 0.796 | 2.98 | 0.151 | 0.0768 | -0.605 | 0.573 | -- | -0.0611 | 12.3 | 1014 | 4030 | -- | -- |
| 287.63 | 0.79 | 3.03 | -0.113 | 0.124 | -0.366 | -- | -1.49 | -0.149 | 15 | 1015 | 7974 | -- | -- |
| 293.53 | 0.798 | 2.97 | 0.171 | 0.112 | -0.619 | -- | -- | -0.0521 | 14.7 | 1014 | 4000 | -- | -- |
| 288.51 | 0.791 | 3.03 | -0.129 | -- | -0.362 | -- | -1.5 | -0.156 | -- | 1015 | 7914 | -- | -- |
| 302.1 | 0.815 | 2.99 | 0.175 | 0.112 | -- | 0.509 | -- | -0.125 | 13.4 | -- | -- | -- | -- |
| 302.95 | 0.815 | 2.99 | 0.193 | 0.131 | -- | -- | -- | -0.121 | 15.3 | -- | -- | -- | -- |
| 294.16 | 0.799 | 2.98 | 0.179 | -- | -0.603 | -- | -- | -0.0564 | -- | 1014 | 4001 | -- | -- |
| 294.38 | 0.799 | 2.98 | -- | 0.103 | -0.597 | -- | -- | -0.0751 | 14.8 | 1014 | 4000 | -- | -- |
| 303.92 | 0.815 | 2.99 | 0.188 | -- | -- | -- | -- | -0.124 | -- | -- | -- | -- | -- |
| 303.94 | 0.816 | 3 | -- | 0.127 | -- | -- | -- | -0.142 | 15.3 | -- | -- | -- | -- |
| 295 | 0.8 | 2.98 | -- | -- | -0.606 | -- | -- | -0.0768 | -- | 1014 | 4000 | -- | -- |
| 304.85 | 0.815 | 3 | -- | -- | -- | -- | -- | -0.145 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 275.38 | wind | 5.0 | 270 | > th | dose dependent | rect. | 12 | 1 |
| 2 | 276.75 | atmosphere | 1010.0 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 4 | 276.82 | wind | 7.0 | 270 | > th | dose independent | rect. | 12 | 1 |
| 41 | 277.17 | atmosphere | 1010.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 42 | 277.17 | atmosphere | 1010.0 | 10 | > th | dose independent | rect. | 9 | 1 |
| 142 | 280.95 | wind | 7.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 143 | 281.49 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 6 | 1 |
| 145 | 281.73 | atmosphere | 1015.0 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 160 | 281.73 | atmosphere | 1015.0 | 1440 | > th | dose dependent | rect. | 10 | 1 |
| 175 | 281.78 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 176 | 281.79 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 6 | 6 |
| 190 | 281.89 | wind | 7.0 | 30 | > th | dose dependent | rect. | 15 | 1 |
| 192 | 281.92 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 4 | 8 |
| 196 | 281.96 | atmosphere | 1010.0 | 270 | > th | dose independent | rect. | 5 | 1 |
| 212 | 282.03 | atmosphere | 1015.0 | 1440 | > th | dose dependent | rect. | 24 | 12 |
| 232 | 282.55 | atmosphere | 1015.0 | 1440 | > th | dose independent | rect. | 24 | 12 |
| 239 | 282.73 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 1 | 11 |
| 243 | 282.84 | wind | 7.0 | 14400 | < th | dose independent | rect. | 6 | 4 |
| 248 | 283.06 | wind | 7.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 250 | 283.38 | wind | 7.0 | 14400 | > th | dose independent | rect. | 6 | 4 |
| 275 | 284.05 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 279 | 284.29 | temperature | 15.0 | 4320 | > th | dose dependent | rect. | 4 | 2 |
| 284 | 284.37 | atmosphere | 1015.0 | 1440 | > th | dose dependent | sin | 3 | NA |
| 288 | 284.44 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 15 | 2 |
| 289 | 284.45 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 291 | 284.46 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 5 | 1 |
| 293 | 284.48 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 14 | 4 |
| 298 | 284.49 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 307 | 284.52 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 14 | 3 |
| 358 | 284.74 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 3 |
| 470 | 285.00 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 22 | 2 |
| 543 | 285.22 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 15 | 1 |
| 591 | 285.34 | wind | 9.0 | 10 | > th | dose independent | rect. | 15 | 1 |
| 646 | 285.46 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 727 | 285.75 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 22 | 3 |
| 755 | 285.86 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 3 | 9 |
| 768 | 285.92 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 814 | 286.10 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 12 | 1 |
| 848 | 286.22 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 21 | 10 |
| 849 | 286.22 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 21 | 10 |
| 862 | 286.26 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 22 | 7 |
| 919 | 286.38 | temperature | 25.0 | 4320 | < th | dose dependent | sin | 11 | NA |
| 954 | 286.46 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 963 | 286.47 | temperature | 15.0 | 4320 | > th | dose dependent | sin | 11 | NA |
| 964 | 286.47 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 2 |