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Os09g0130300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.33 (0.0225) R2 : 0.586
β1 : -1.44 (0.0823) R2dD : 0.289 R2D : 0.331
β2 : 0.807 (0.0567) R2dC : 0.185 R2C : 0.164
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.394 (0.048) R2dN8 : 0.0821 R2N8 : 0.111
σ : 0.423
deviance : 81.45
__
_____
C
peak time of C : 20.4
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
72.03 0.399 9.38 -1.69 0.941 0.157 -0.032 3.75 0.338 19.9 30 255 -- --
72.89 0.398 9.34 -1.4 0.973 0.603 0.0677 -- 0.343 20 30.4 384 -- --
72.04 0.395 9.38 -1.69 0.941 0.156 -- 3.76 0.338 19.9 29.99 254 -- --
72.69 0.397 9.34 -1.36 0.961 0.678 -- -- 0.345 19.9 31.27 377 -- --
112.72 0.494 9.39 -1.97 -- -0.103 -- 3.85 0.326 -- 31.3 1554 -- --
81.23 0.423 9.33 -1.45 0.808 -- -0.277 -- 0.395 20.3 -- -- -- --
81.45 0.423 9.33 -1.44 0.807 -- -- -- 0.394 20.4 -- -- -- --
113.91 0.497 9.32 -1.37 -- 0.275 -- -- 0.319 -- 30.7 2953 -- --
120.84 0.512 9.31 -- 1.02 0.868 -- -- 0.48 19.8 31.2 380 -- --
117.63 0.507 9.31 -1.44 -- -- -- -- 0.386 -- -- -- -- --
136.11 0.546 9.29 -- 0.814 -- -- -- 0.554 20.2 -- -- -- --
156.27 0.582 9.25 -- -- 0.647 -- -- 0.643 -- 27.1 5768 -- --
172.7 0.613 9.27 -- -- -- -- -- 0.546 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 66.37 humidity 50.0 270 > th dose independent rect. 6 22
3 66.46 humidity 70.0 270 > th dose independent rect. 16 11
5 66.71 temperature 30.0 270 < th dose independent rect. 7 19
6 66.77 temperature 30.0 270 < th dose independent rect. 16 11
7 66.77 radiation 10.0 270 < th dose dependent rect. 15 12
11 66.92 humidity 50.0 270 > th dose independent rect. 7 19
18 67.31 humidity 50.0 270 > th dose independent rect. 16 11
22 67.36 radiation 1.0 270 > th dose independent rect. 10 21
29 67.64 precipitation 0.1 30 < th dose independent rect. 15 18
30 67.64 precipitation 0.1 30 < th dose dependent rect. 15 18
31 67.65 wind 7.0 10 < th dose independent rect. 15 18
36 67.71 humidity 90.0 10 < th dose dependent rect. 15 18
43 67.80 precipitation 0.1 270 < th dose independent rect. 10 23
44 67.80 precipitation 0.1 270 < th dose dependent rect. 10 23
49 67.91 humidity 50.0 30 > th dose independent rect. 9 19
53 68.01 radiation 1.0 270 < th dose independent rect. 15 12
63 68.08 radiation 20.0 10 < th dose dependent sin 12 NA
71 68.17 humidity 50.0 270 > th dose dependent rect. 16 10
73 68.21 wind 9.0 10 < th dose independent rect. 9 6
74 68.21 humidity 90.0 30 < th dose dependent rect. 13 20
75 68.22 humidity 90.0 270 < th dose independent rect. 9 1
85 68.32 wind 1.0 10 > th dose independent rect. 9 6
87 68.34 precipitation 0.1 30 < th dose independent rect. 9 6
88 68.34 precipitation 0.1 30 < th dose dependent rect. 9 6
89 68.35 temperature 10.0 30 > th dose independent rect. 9 6
91 68.35 temperature 10.0 1440 > th dose independent rect. 10 6
94 68.35 atmosphere 995.0 30 > th dose independent rect. 9 6
95 68.35 atmosphere 1015.0 30 < th dose independent rect. 9 6
97 68.35 temperature 10.0 30 > th dose independent rect. 15 18
98 68.35 temperature 10.0 1440 > th dose independent rect. 16 18
123 68.56 humidity 50.0 30 > th dose independent rect. 9 17
140 68.66 radiation 40.0 30 < th dose independent rect. 15 18
144 68.68 humidity 50.0 30 > th dose independent rect. 9 6
152 68.71 humidity 90.0 270 < th dose dependent rect. 12 8
156 68.77 radiation 1.0 10 > th dose independent rect. 9 6
162 68.81 atmosphere 995.0 30 > th dose dependent rect. 15 18
177 68.88 temperature 15.0 10 > th dose independent rect. 9 19
178 68.88 temperature 10.0 30 > th dose dependent rect. 2 7
180 68.90 humidity 50.0 270 > th dose independent rect. 7 15
186 68.92 humidity 90.0 10 < th dose independent rect. 9 6
191 68.92 radiation 10.0 270 < th dose dependent rect. 9 17
192 68.93 radiation 1.0 270 > th dose independent rect. 9 1
199 68.98 temperature 15.0 270 > th dose independent rect. 9 1
216 69.06 temperature 10.0 10 > th dose dependent rect. 4 5
223 69.10 wind 7.0 270 < th dose independent rect. 9 1
233 69.13 temperature 15.0 270 > th dose independent rect. 7 19
256 69.23 precipitation 0.1 270 < th dose independent rect. 9 1
257 69.23 precipitation 0.1 270 < th dose dependent rect. 9 1
259 69.24 atmosphere 995.0 10 > th dose independent rect. 9 19
266 69.25 radiation 10.0 270 < th dose dependent rect. 6 21
267 69.26 humidity 90.0 10 < th dose dependent rect. 15 6
271 69.29 wind 5.0 90 < th dose independent rect. 3 6
273 69.29 temperature 10.0 10 > th dose dependent rect. 9 6
286 69.33 atmosphere 995.0 270 > th dose independent rect. 9 1
287 69.33 atmosphere 1015.0 270 < th dose independent rect. 9 1
288 69.33 temperature 10.0 270 > th dose independent rect. 10 23
293 69.37 radiation 1.0 30 > th dose independent rect. 15 18
294 69.37 temperature 10.0 270 > th dose dependent rect. 9 1
303 69.39 temperature 25.0 10 > th dose dependent rect. 15 18
306 69.41 humidity 70.0 90 > th dose independent sin 14 NA
307 69.41 precipitation 0.1 270 < th dose independent rect. 3 14
309 69.41 precipitation 0.1 270 < th dose dependent rect. 3 14
310 69.42 humidity 50.0 270 > th dose independent rect. 9 1
315 69.44 humidity 50.0 270 > th dose independent rect. 7 12
320 69.45 atmosphere 995.0 30 > th dose independent rect. 15 18
336 69.54 wind 1.0 270 > th dose independent rect. 9 1
337 69.54 wind 5.0 90 < th dose independent rect. 23 10
341 69.55 wind 9.0 10 < th dose dependent rect. 15 18
357 69.62 wind 5.0 10 < th dose independent rect. 4 5
363 69.64 precipitation 0.1 10 < th dose independent rect. 4 5
364 69.64 wind 9.0 30 < th dose independent rect. 9 19
365 69.64 precipitation 0.1 10 < th dose dependent rect. 4 5
382 69.68 atmosphere 995.0 30 > th dose independent rect. 9 17
383 69.68 atmosphere 995.0 10 > th dose dependent rect. 4 5
407 69.73 temperature 10.0 10 > th dose independent rect. 4 5
409 69.73 temperature 30.0 10 < th dose independent rect. 4 5
410 69.73 humidity 50.0 10 > th dose independent rect. 4 5
412 69.73 atmosphere 995.0 10 > th dose independent rect. 4 5
413 69.73 atmosphere 1015.0 10 < th dose independent rect. 4 5
415 69.73 radiation 1.0 90 > th dose independent rect. 13 20
445 69.79 wind 9.0 270 < th dose independent rect. 17 10
449 69.80 precipitation 0.1 30 < th dose independent rect. 2 7
452 69.80 precipitation 0.1 30 < th dose dependent rect. 2 7
473 69.85 temperature 10.0 10 > th dose dependent rect. 15 18
476 69.86 temperature 10.0 270 > th dose independent rect. 17 10
480 69.86 temperature 10.0 270 > th dose independent rect. 3 14
481 69.86 atmosphere 1015.0 270 < th dose independent rect. 3 14
491 69.87 radiation 1.0 30 > th dose dependent rect. 15 18
498 69.89 wind 1.0 30 > th dose independent rect. 15 18
505 69.90 atmosphere 1000.0 30 > th dose dependent rect. 2 7
511 69.92 wind 1.0 270 > th dose independent rect. 13 18
514 69.93 wind 9.0 270 < th dose independent rect. 7 19
515 69.93 temperature 30.0 270 < th dose independent rect. 14 21
520 69.95 wind 1.0 270 > th dose independent rect. 11 20
537 69.98 atmosphere 1015.0 10 < th dose independent rect. 9 19
546 69.99 radiation 40.0 30 < th dose independent rect. 4 5
552 70.00 humidity 80.0 90 < th dose independent rect. 13 7
574 70.03 temperature 10.0 1440 > th dose independent rect. 3 7
577 70.03 atmosphere 995.0 1440 > th dose independent rect. 3 7
579 70.03 temperature 10.0 1440 > th dose independent rect. 10 17
596 70.05 humidity 50.0 30 > th dose independent rect. 9 9
597 70.05 atmosphere 1015.0 30 < th dose independent rect. 9 17
604 70.06 temperature 30.0 270 < th dose independent rect. 7 10
606 70.06 temperature 15.0 90 > th dose independent rect. 9 14
609 70.07 radiation 1.0 90 < th dose independent sin 13 NA
614 70.08 temperature 30.0 270 < th dose independent rect. 9 1
617 70.08 precipitation 0.1 10 < th dose independent rect. 9 19
619 70.08 precipitation 0.1 10 < th dose dependent rect. 9 19
620 70.09 humidity 50.0 4320 > th dose independent rect. 5 5
623 70.09 humidity 70.0 90 < th dose independent rect. 15 17
632 70.10 atmosphere 1005.0 10 > th dose dependent rect. 24 9
648 70.13 temperature 10.0 30 > th dose independent rect. 2 7
651 70.13 humidity 50.0 30 > th dose independent rect. 2 7
653 70.13 atmosphere 995.0 30 > th dose independent rect. 2 7
654 70.13 atmosphere 1015.0 30 < th dose independent rect. 2 7
658 70.13 humidity 50.0 270 > th dose dependent rect. 7 19
668 70.15 wind 9.0 270 < th dose dependent rect. 2 5
681 70.16 temperature 30.0 270 < th dose independent rect. 7 12
699 70.19 wind 5.0 270 < th dose independent rect. 3 3
710 70.20 wind 9.0 90 < th dose independent rect. 9 14
715 70.21 precipitation 0.1 90 < th dose independent rect. 23 10
718 70.21 radiation 10.0 270 < th dose dependent sin 15 NA
720 70.21 precipitation 0.1 90 < th dose dependent rect. 23 10
722 70.22 temperature 10.0 270 > th dose independent rect. 2 5
725 70.22 humidity 50.0 270 > th dose independent rect. 2 5
727 70.22 atmosphere 995.0 270 > th dose independent rect. 2 5
728 70.22 atmosphere 1015.0 270 < th dose independent rect. 2 5
729 70.22 radiation 30.0 270 < th dose independent rect. 2 5
748 70.24 temperature 10.0 1440 > th dose independent rect. 5 5
751 70.24 atmosphere 995.0 1440 > th dose independent rect. 5 5
752 70.24 atmosphere 1015.0 1440 < th dose independent rect. 5 5
764 70.24 temperature 10.0 1440 > th dose independent rect. 10 19
771 70.25 radiation 1.0 270 > th dose independent rect. 8 3
796 70.28 radiation 1.0 270 > th dose independent rect. 11 8
811 70.29 temperature 15.0 270 > th dose independent rect. 8 3
831 70.34 temperature 30.0 270 < th dose independent sin 18 NA
856 70.37 temperature 30.0 720 < th dose independent rect. 7 4
857 70.37 humidity 80.0 10 < th dose independent rect. 15 6
859 70.37 humidity 50.0 4320 > th dose independent rect. 3 7
863 70.38 temperature 30.0 270 < th dose independent rect. 7 8
884 70.41 humidity 70.0 270 < th dose independent rect. 12 19
887 70.41 atmosphere 995.0 30 > th dose dependent rect. 9 6
898 70.42 atmosphere 995.0 90 > th dose independent rect. 9 14
925 70.46 wind 9.0 270 < th dose independent rect. 6 21
937 70.48 temperature 15.0 90 > th dose dependent rect. 13 7
941 70.49 precipitation 0.1 270 < th dose independent rect. 3 3
943 70.49 temperature 30.0 90 < th dose independent rect. 23 10
946 70.49 precipitation 0.1 270 < th dose dependent rect. 3 3
975 70.53 humidity 60.0 270 > th dose independent rect. 7 8