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Os09g0129400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.97 (0.0163) R2 : 0.684
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.25 (0.0421) R2dC : 0.61 R2C : 0.601
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.331 (0.0343) R2dN8 : 0.0834 R2N8 : 0.0743
σ : 0.307
deviance : 43.12
__
_____
C
peak time of C : 4.51
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
33.82 0.273 9.98 -0.33 1.3 0.251 0.55 0.643 0.265 4.27 21.3 29 -- --
35.73 0.278 9.99 -0.47 1.29 0.222 0.0976 -- 0.238 4.34 21.2 45 -- --
34.07 0.272 9.98 -0.336 1.31 0.241 -- 0.573 0.255 4.43 21.51 266 -- --
35.58 0.278 10 -0.506 1.3 0.244 -- -- 0.211 4.42 21.44 230 -- --
81.61 0.421 9.9 0.271 -- -0.787 -- 1.29 0.654 -- 25.83 265 -- --
38.37 0.29 9.98 -0.422 1.25 -- 0.113 -- 0.284 4.5 -- -- -- --
38.4 0.29 9.98 -0.423 1.25 -- -- -- 0.284 4.5 -- -- -- --
78.17 0.412 9.95 -0.187 -- -0.881 -- -- 0.496 -- 27.5 357 -- --
41.83 0.301 9.98 -- 1.28 0.165 -- -- 0.29 4.44 21.4 221 -- --
122.54 0.517 9.99 -0.374 -- -- -- -- 0.317 -- -- -- -- --
43.12 0.307 9.97 -- 1.25 -- -- -- 0.331 4.51 -- -- -- --
78.99 0.414 9.95 -- -- -0.905 -- -- 0.485 -- 27.53 359 -- --
126.23 0.524 9.98 -- -- -- -- -- 0.358 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 33.32 wind 3.0 14400 < th dose dependent rect. 21 5
3 33.43 precipitation 0.1 1440 < th dose independent rect. 5 1
4 33.43 precipitation 0.1 1440 < th dose dependent rect. 5 1
5 33.47 precipitation 0.1 1440 > th dose independent rect. 5 1
7 33.49 precipitation 0.1 1440 > th dose dependent rect. 4 2
16 33.61 temperature 20.0 720 > th dose dependent rect. 21 1
20 33.67 temperature 20.0 720 > th dose dependent rect. 20 3
22 33.69 temperature 20.0 10 > th dose dependent rect. 16 17
28 33.74 temperature 25.0 270 < th dose dependent rect. 20 10
30 33.76 temperature 20.0 90 > th dose dependent rect. 21 11
31 33.77 temperature 25.0 270 < th dose dependent rect. 21 8
32 33.77 temperature 25.0 90 < th dose dependent rect. 23 8
34 33.78 humidity 90.0 4320 > th dose dependent rect. 8 1
39 33.80 wind 3.0 14400 < th dose dependent rect. 1 1
41 33.81 temperature 20.0 10 > th dose dependent rect. 21 11
43 33.83 precipitation 0.1 4320 > th dose independent rect. 7 1
44 33.83 precipitation 0.1 4320 > th dose dependent rect. 7 1
48 33.84 precipitation 0.1 1440 < th dose independent rect. 24 6
50 33.84 precipitation 0.1 1440 < th dose dependent rect. 24 6
53 33.86 temperature 25.0 10 < th dose dependent rect. 22 9
55 33.87 wind 3.0 14400 < th dose dependent rect. 20 11
57 33.89 precipitation 0.1 4320 < th dose independent rect. 7 1
59 33.89 precipitation 0.1 4320 < th dose dependent rect. 7 1
69 33.91 temperature 25.0 10 < th dose dependent sin 8 NA
87 33.95 precipitation 0.1 1440 > th dose independent rect. 24 6
122 34.01 temperature 25.0 90 < th dose dependent rect. 21 15
124 34.01 temperature 25.0 90 < th dose dependent rect. 21 18
135 34.03 precipitation 0.1 14400 > th dose dependent rect. 4 13
138 34.04 temperature 25.0 270 < th dose dependent sin 11 NA
141 34.04 temperature 25.0 10 < th dose dependent rect. 22 15
142 34.04 temperature 25.0 90 < th dose dependent rect. 21 20
143 34.05 precipitation 0.1 1440 > th dose dependent rect. 2 4
169 34.08 precipitation 0.1 1440 > th dose dependent rect. 24 6
177 34.09 precipitation 0.1 1440 < th dose independent rect. 24 8
178 34.09 precipitation 0.1 1440 < th dose dependent rect. 24 8
189 34.11 precipitation 0.1 14400 > th dose dependent rect. 16 1
210 34.13 wind 3.0 14400 < th dose dependent sin 10 NA
217 34.14 precipitation 0.1 14400 > th dose dependent rect. 18 2
228 34.15 precipitation 0.1 1440 > th dose independent rect. 24 8
229 34.15 wind 1.0 14400 > th dose independent rect. 19 17
242 34.17 precipitation 0.1 14400 > th dose independent rect. 16 1
244 34.17 precipitation 0.1 14400 < th dose independent rect. 16 1
249 34.17 precipitation 0.1 14400 > th dose independent rect. 4 16
250 34.17 precipitation 0.1 14400 < th dose independent rect. 4 16
253 34.17 precipitation 0.1 14400 < th dose dependent rect. 16 1
256 34.17 precipitation 0.1 14400 < th dose dependent rect. 4 16
271 34.19 temperature 20.0 10 > th dose dependent sin 10 NA
342 34.24 temperature 20.0 10 > th dose dependent rect. 16 12
348 34.25 precipitation 0.1 14400 < th dose independent rect. 4 13
353 34.25 precipitation 0.1 1440 > th dose dependent rect. 24 8
357 34.25 precipitation 0.1 14400 < th dose dependent rect. 4 13
359 34.25 precipitation 0.1 14400 > th dose dependent rect. 3 17
365 34.26 precipitation 0.1 14400 > th dose independent rect. 4 13
408 34.29 temperature 25.0 720 < th dose dependent rect. 19 5
422 34.30 precipitation 0.1 14400 > th dose dependent rect. 7 10
427 34.31 wind 1.0 14400 < th dose independent rect. 1 2
437 34.32 temperature 25.0 720 < th dose dependent rect. 21 2
441 34.32 precipitation 0.1 14400 > th dose dependent rect. 9 8
490 34.36 wind 1.0 14400 < th dose independent rect. 19 17
530 34.39 wind 1.0 14400 > th dose independent rect. 19 13
540 34.40 precipitation 0.1 14400 > th dose independent rect. 18 2
543 34.40 precipitation 0.1 14400 < th dose independent rect. 9 8
550 34.40 precipitation 0.1 14400 < th dose dependent rect. 9 8
563 34.41 precipitation 0.1 1440 < th dose independent rect. 24 13
571 34.41 precipitation 0.1 1440 < th dose dependent rect. 24 13
579 34.42 precipitation 0.1 14400 > th dose independent rect. 9 8
595 34.43 precipitation 0.1 14400 < th dose independent rect. 18 2
599 34.43 precipitation 0.1 14400 < th dose dependent rect. 18 2
607 34.44 wind 1.0 14400 < th dose independent rect. 19 12
658 34.47 wind 1.0 14400 < th dose independent rect. 19 10
659 34.47 precipitation 0.1 14400 < th dose independent rect. 7 10
674 34.47 precipitation 0.1 14400 < th dose dependent rect. 7 10
679 34.48 precipitation 0.1 14400 > th dose independent rect. 16 4
681 34.48 wind 1.0 14400 > th dose independent rect. 21 8
682 34.48 precipitation 0.1 14400 > th dose independent rect. 7 10
702 34.49 precipitation 0.1 14400 > th dose independent rect. 7 13
703 34.49 precipitation 0.1 14400 < th dose independent rect. 7 13
715 34.49 precipitation 0.1 14400 < th dose dependent rect. 7 13
722 34.50 precipitation 0.1 14400 < th dose independent rect. 16 4
731 34.50 precipitation 0.1 14400 < th dose dependent rect. 16 4
746 34.51 wind 1.0 14400 > th dose independent rect. 19 10
761 34.52 wind 1.0 14400 > th dose independent sin 10 NA
773 34.52 temperature 25.0 270 < th dose dependent rect. 9 21
796 34.54 wind 3.0 14400 < th dose independent rect. 21 5
799 34.54 precipitation 0.1 14400 > th dose independent rect. 9 11
801 34.54 precipitation 0.1 14400 < th dose independent rect. 9 11
803 34.54 temperature 20.0 30 > th dose independent rect. 17 23
814 34.54 precipitation 0.1 14400 < th dose dependent rect. 9 11
839 34.56 wind 1.0 14400 > th dose independent rect. 1 2
865 34.57 precipitation 0.1 14400 > th dose dependent sin 2 NA
882 34.58 wind 1.0 14400 < th dose independent rect. 21 8
891 34.59 wind 3.0 14400 < th dose independent rect. 21 10
902 34.60 temperature 20.0 30 > th dose independent sin 9 NA
936 34.61 wind 3.0 14400 < th dose dependent rect. 5 2
948 34.62 precipitation 0.1 14400 > th dose independent sin 1 NA
949 34.62 precipitation 0.1 14400 < th dose independent sin 1 NA
957 34.62 precipitation 0.1 14400 < th dose dependent sin 1 NA
973 34.63 wind 1.0 1440 < th dose independent rect. 12 2
993 34.64 wind 1.0 14400 < th dose independent sin 11 NA
994 34.64 temperature 25.0 720 > th dose independent rect. 20 1
996 34.64 wind 3.0 14400 < th dose independent rect. 5 2