Os09g0125100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ataxin-2, C-terminal domain containing protein.
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Os09g0125100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ataxin-2, C-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 81.92 | 0.425 | 6.36 | 0.176 | 0.368 | -1.13 | 0.648 | 0.597 | 0.271 | 9.58 | 10.05 | 271 | -- | -- |
| 82.82 | 0.424 | 6.37 | 0.164 | 0.354 | -1.12 | 0.966 | -- | 0.283 | 9.76 | 10.19 | 271 | -- | -- |
| 83.07 | 0.424 | 6.36 | 0.203 | 0.351 | -1.13 | -- | 0.923 | 0.28 | 9.21 | 10.95 | 267 | -- | -- |
| 86.05 | 0.432 | 6.37 | 0.169 | 0.338 | -1.05 | -- | -- | 0.259 | 8.58 | 11.07 | 269 | -- | -- |
| 84.06 | 0.427 | 6.36 | 0.163 | -- | -1.14 | -- | 0.72 | 0.36 | -- | 10.96 | 387 | -- | -- |
| 105.59 | 0.482 | 6.4 | -0.00543 | 0.986 | -- | -0.501 | -- | 0.147 | 3.63 | -- | -- | -- | -- |
| 106.33 | 0.483 | 6.4 | 0.00274 | 0.985 | -- | -- | -- | 0.149 | 3.71 | -- | -- | -- | -- |
| 85.64 | 0.431 | 6.36 | 0.167 | -- | -1.18 | -- | -- | 0.304 | -- | 10.95 | 390 | -- | -- |
| 86.76 | 0.434 | 6.37 | -- | 0.344 | -1.02 | -- | -- | 0.247 | 8.15 | 11.08 | 270 | -- | -- |
| 160.07 | 0.591 | 6.4 | 0.0438 | -- | -- | -- | -- | 0.176 | -- | -- | -- | -- | -- |
| 106.33 | 0.482 | 6.4 | -- | 0.985 | -- | -- | -- | 0.149 | 3.71 | -- | -- | -- | -- |
| 86.39 | 0.433 | 6.38 | -- | -- | -1.16 | -- | -- | 0.277 | -- | 10.95 | 387 | -- | -- |
| 160.12 | 0.591 | 6.4 | -- | -- | -- | -- | -- | 0.171 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 79.41 | radiation | 10 | 270 | > th | dose independent | rect. | 12 | 23 |
| 2 | 79.61 | radiation | 10 | 720 | > th | dose independent | sin | 7 | NA |
| 4 | 79.85 | radiation | 10 | 720 | > th | dose independent | rect. | 6 | 5 |
| 21 | 81.09 | radiation | 10 | 720 | > th | dose independent | rect. | 17 | 20 |
| 37 | 81.85 | radiation | 10 | 270 | > th | dose independent | rect. | 6 | 11 |
| 51 | 81.94 | radiation | 10 | 270 | > th | dose independent | no | NA | NA |
| 144 | 81.97 | radiation | 20 | 270 | < th | dose dependent | rect. | 17 | 23 |
| 180 | 83.26 | radiation | 1 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 210 | 83.36 | radiation | 20 | 270 | < th | dose dependent | no | NA | NA |
| 213 | 83.48 | radiation | 20 | 270 | < th | dose dependent | rect. | 20 | 23 |
| 215 | 83.52 | radiation | 20 | 270 | < th | dose dependent | rect. | 12 | 23 |
| 217 | 83.60 | radiation | 20 | 270 | < th | dose dependent | rect. | 2 | 23 |
| 269 | 84.30 | radiation | 20 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 277 | 84.66 | radiation | 10 | 270 | < th | dose independent | rect. | 17 | 23 |
| 280 | 84.73 | radiation | 20 | 270 | < th | dose dependent | rect. | 5 | 23 |
| 285 | 84.78 | radiation | 20 | 720 | < th | dose dependent | sin | 5 | NA |
| 288 | 84.85 | radiation | 20 | 720 | < th | dose dependent | rect. | 24 | 14 |
| 290 | 84.91 | radiation | 20 | 720 | < th | dose dependent | rect. | 19 | 19 |
| 293 | 84.96 | radiation | 10 | 270 | < th | dose independent | rect. | 12 | 23 |
| 298 | 85.09 | radiation | 10 | 270 | < th | dose independent | rect. | 2 | 23 |
| 330 | 85.55 | radiation | 10 | 270 | < th | dose independent | no | NA | NA |
| 334 | 85.62 | radiation | 20 | 720 | < th | dose dependent | rect. | 5 | 6 |
| 337 | 85.70 | radiation | 20 | 720 | < th | dose dependent | rect. | 5 | 8 |
| 345 | 85.75 | radiation | 10 | 270 | < th | dose independent | rect. | 8 | 23 |
| 348 | 85.80 | radiation | 20 | 720 | < th | dose dependent | rect. | 2 | 12 |
| 361 | 85.89 | humidity | 80 | 720 | < th | dose independent | rect. | 8 | 7 |
| 367 | 85.93 | humidity | 80 | 720 | > th | dose independent | rect. | 8 | 6 |
| 386 | 85.99 | radiation | 10 | 270 | < th | dose independent | rect. | 20 | 23 |
| 483 | 86.15 | radiation | 10 | 270 | < th | dose independent | rect. | 4 | 23 |
| 504 | 86.37 | humidity | 60 | 720 | > th | dose dependent | rect. | 9 | 5 |
| 543 | 86.67 | radiation | 20 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 554 | 86.75 | humidity | 80 | 270 | < th | dose independent | rect. | 7 | 11 |
| 600 | 86.91 | humidity | 70 | 270 | > th | dose dependent | sin | 0 | NA |
| 606 | 86.93 | radiation | 40 | 270 | < th | dose dependent | sin | 2 | NA |
| 609 | 86.95 | radiation | 10 | 720 | < th | dose independent | rect. | 5 | 6 |
| 610 | 86.95 | humidity | 80 | 720 | > th | dose independent | rect. | 5 | 9 |
| 634 | 87.06 | radiation | 1 | 720 | > th | dose dependent | sin | 8 | NA |
| 643 | 87.09 | humidity | 60 | 720 | > th | dose dependent | rect. | 5 | 10 |
| 649 | 87.11 | humidity | 80 | 270 | < th | dose independent | sin | 23 | NA |
| 665 | 87.16 | radiation | 10 | 720 | < th | dose dependent | rect. | 6 | 17 |
| 668 | 87.18 | humidity | 80 | 270 | < th | dose independent | rect. | 8 | 15 |
| 693 | 87.22 | radiation | 1 | 720 | > th | dose dependent | rect. | 6 | 5 |
| 697 | 87.23 | radiation | 1 | 270 | > th | dose dependent | no | NA | NA |
| 699 | 87.23 | radiation | 1 | 270 | > th | dose dependent | rect. | 5 | 14 |
| 802 | 87.30 | radiation | 1 | 720 | > th | dose dependent | rect. | 17 | 18 |
| 840 | 87.41 | humidity | 70 | 270 | > th | dose independent | rect. | 9 | 22 |
| 849 | 87.45 | temperature | 25 | 270 | > th | dose dependent | sin | 3 | NA |
| 882 | 87.50 | radiation | 1 | 720 | > th | dose dependent | rect. | 17 | 20 |
| 921 | 87.57 | humidity | 70 | 720 | > th | dose independent | rect. | 24 | 14 |
| 931 | 87.60 | humidity | 80 | 270 | > th | dose independent | sin | 0 | NA |
| 949 | 87.61 | humidity | 60 | 270 | > th | dose dependent | rect. | 2 | 23 |
| 952 | 87.63 | humidity | 60 | 720 | > th | dose dependent | rect. | 2 | 14 |
| 969 | 87.64 | temperature | 15 | 270 | > th | dose dependent | rect. | 7 | 10 |
| 982 | 87.68 | humidity | 90 | 720 | < th | dose dependent | rect. | 7 | 8 |
| 1000 | 87.73 | humidity | 80 | 720 | < th | dose independent | rect. | 8 | 3 |