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Os09g0123300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Calmodulin-binding receptor-like kinase.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.7 (0.0195) R2 : 0.803
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.14 (0.0498) R2dC : 0.796 R2C : 0.786
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.232 (0.0411) R2dN8 : 0.0178 R2N8 : 0.00756
σ : 0.368
deviance : 61.86
__
_____
C
peak time of C : 16
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
50.82 0.335 10.7 0.481 2.23 0.506 0.349 -0.868 0.31 16.4 81.12 800 -- --
52.1 0.336 10.7 0.4 2.21 0.503 0.428 -- 0.3 16.4 82.95 813 -- --
50.86 0.332 10.7 0.47 2.23 0.499 -- -0.879 0.31 16.4 82.46 792 -- --
52.56 0.338 10.7 0.401 2.22 0.494 -- -- 0.303 16.4 83 813 -- --
203.8 0.669 10.7 0.342 -- -0.961 -- -0.342 0.227 -- 82.46 792 -- --
57.32 0.355 10.7 0.402 2.14 -- 0.264 -- 0.276 16 -- -- -- --
57.52 0.355 10.7 0.406 2.15 -- -- -- 0.277 16 -- -- -- --
196.94 0.656 10.7 0.23 -- -1.03 -- -- 0.19 -- 74.05 1880 -- --
56.33 0.35 10.7 -- 2.07 0.63 -- -- 0.277 16 82.73 1293 -- --
309.29 0.822 10.7 0.318 -- -- -- -- 0.22 -- -- -- -- --
61.86 0.368 10.7 -- 2.14 -- -- -- 0.232 16 -- -- -- --
169.94 0.607 10.7 -- -- -1.39 -- -- 0.122 -- 75 258 -- --
311.95 0.824 10.7 -- -- -- -- -- 0.185 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 42.23 precipitation 0.1 720 < th dose independent rect. 17 12
2 42.23 precipitation 0.1 720 < th dose dependent rect. 17 12
3 42.34 precipitation 0.1 720 < th dose independent rect. 9 20
4 42.34 precipitation 0.1 720 < th dose dependent rect. 9 20
5 43.03 precipitation 0.1 720 < th dose independent rect. 17 4
6 43.03 precipitation 0.1 720 < th dose dependent rect. 17 4
7 43.14 humidity 50.0 720 > th dose dependent rect. 20 5
12 43.39 precipitation 0.1 720 < th dose independent rect. 17 20
13 43.39 precipitation 0.1 720 < th dose dependent rect. 17 20
17 43.68 wind 3.0 30 < th dose independent rect. 3 3
31 43.84 wind 5.0 90 < th dose dependent rect. 3 3
37 44.06 radiation 20.0 270 < th dose independent rect. 16 13
38 44.06 radiation 40.0 270 < th dose dependent rect. 16 13
41 44.08 wind 7.0 720 < th dose independent rect. 17 4
42 44.10 precipitation 0.1 10 < th dose independent rect. 3 3
44 44.10 precipitation 0.1 10 < th dose dependent rect. 3 3
56 44.21 wind 9.0 720 < th dose independent rect. 17 12
64 44.41 wind 1.0 720 > th dose independent rect. 17 4
72 44.61 radiation 20.0 720 < th dose independent rect. 17 4
74 44.62 temperature 10.0 720 > th dose independent rect. 17 4
77 44.62 temperature 10.0 720 > th dose independent rect. 21 20
78 44.67 temperature 10.0 270 > th dose independent rect. 5 11
79 44.67 atmosphere 1015.0 270 < th dose independent rect. 5 11
80 44.67 temperature 10.0 270 > th dose independent rect. 16 13
89 44.74 temperature 10.0 10 > th dose dependent rect. 3 3
91 44.75 wind 9.0 720 < th dose independent rect. 5 4
92 44.75 temperature 10.0 720 > th dose independent rect. 5 4
93 44.75 humidity 50.0 720 > th dose independent rect. 5 4
94 44.75 atmosphere 995.0 720 > th dose independent rect. 5 4
95 44.75 atmosphere 1015.0 720 < th dose independent rect. 5 4
96 44.75 temperature 10.0 720 > th dose independent rect. 9 20
102 44.82 wind 9.0 720 < th dose independent rect. 9 20
113 44.91 precipitation 0.1 270 < th dose independent rect. 5 11
114 44.91 precipitation 0.1 270 < th dose dependent rect. 5 11
120 44.99 precipitation 0.1 720 < th dose independent rect. 1 4
121 44.99 precipitation 0.1 720 < th dose dependent rect. 1 4
125 45.03 atmosphere 1005.0 10 > th dose independent rect. 3 3
127 45.03 atmosphere 1015.0 720 < th dose independent rect. 17 4
128 45.03 precipitation 0.1 720 < th dose independent rect. 2 18
130 45.03 precipitation 0.1 720 < th dose dependent rect. 2 18
137 45.09 precipitation 0.1 10 < th dose independent rect. 6 21
138 45.09 precipitation 0.1 10 < th dose dependent rect. 6 21
142 45.12 precipitation 0.1 720 < th dose independent rect. 8 13
143 45.12 precipitation 0.1 720 < th dose dependent rect. 8 13
144 45.13 wind 9.0 270 < th dose independent rect. 5 11
146 45.15 radiation 40.0 720 < th dose independent rect. 5 4
150 45.17 temperature 10.0 90 > th dose independent rect. 3 3
153 45.17 temperature 30.0 90 < th dose independent rect. 3 3
154 45.17 humidity 50.0 90 > th dose independent rect. 3 3
157 45.17 atmosphere 995.0 90 > th dose independent rect. 3 3
158 45.17 atmosphere 1010.0 90 < th dose independent rect. 3 3
160 45.17 radiation 20.0 90 < th dose independent rect. 3 3
163 45.17 temperature 10.0 90 > th dose independent rect. 6 21
164 45.18 precipitation 0.1 720 < th dose independent rect. 5 4
165 45.18 precipitation 0.1 720 < th dose dependent rect. 5 4
166 45.19 precipitation 0.1 270 < th dose independent rect. 1 12
167 45.19 precipitation 0.1 270 < th dose dependent rect. 1 12
170 45.21 temperature 10.0 10 > th dose independent rect. 3 3
172 45.21 temperature 30.0 10 < th dose independent rect. 3 3
173 45.21 humidity 50.0 10 > th dose independent rect. 3 3
176 45.21 atmosphere 995.0 10 > th dose independent rect. 3 3
177 45.21 atmosphere 1010.0 10 < th dose independent rect. 3 3
179 45.21 radiation 20.0 10 < th dose independent rect. 3 3
182 45.21 temperature 10.0 10 > th dose independent rect. 6 21
187 45.28 radiation 1.0 720 > th dose independent rect. 8 6
188 45.28 precipitation 0.1 720 < th dose independent rect. 9 11
189 45.28 temperature 15.0 90 > th dose independent rect. 18 12
190 45.28 radiation 40.0 90 < th dose dependent rect. 3 3
191 45.28 precipitation 0.1 720 < th dose dependent rect. 9 11
192 45.29 precipitation 0.1 720 < th dose independent rect. 24 14
193 45.29 precipitation 0.1 720 < th dose dependent rect. 24 14
224 45.37 atmosphere 1000.0 10 > th dose dependent rect. 3 3
225 45.38 precipitation 0.1 720 < th dose independent rect. 2 10
226 45.38 precipitation 0.1 720 < th dose dependent rect. 2 10
238 45.44 wind 9.0 90 < th dose independent rect. 6 21
243 45.51 wind 9.0 10 < th dose independent rect. 6 21
247 45.57 wind 9.0 720 < th dose independent rect. 17 20
248 45.59 wind 1.0 720 > th dose independent rect. 18 1
257 45.64 temperature 15.0 720 > th dose independent rect. 18 1
258 45.64 precipitation 0.1 720 < th dose independent rect. 24 6
259 45.64 precipitation 0.1 720 < th dose dependent rect. 24 6
261 45.65 humidity 60.0 90 > th dose independent rect. 18 12
266 45.67 temperature 30.0 90 < th dose independent rect. 18 12
274 45.71 atmosphere 1015.0 720 < th dose independent rect. 1 4
288 45.76 temperature 10.0 720 > th dose dependent rect. 18 1
294 45.77 atmosphere 995.0 270 > th dose independent rect. 5 11
298 45.79 humidity 80.0 720 < th dose independent rect. 18 1
319 45.81 temperature 15.0 270 > th dose independent rect. 1 12
322 45.83 temperature 30.0 720 < th dose independent rect. 5 4
325 45.84 humidity 50.0 90 > th dose dependent rect. 3 3
327 45.85 atmosphere 1015.0 1440 < th dose independent rect. 3 4
329 45.86 humidity 50.0 270 > th dose independent rect. 16 13
351 45.92 radiation 40.0 720 < th dose dependent rect. 17 4
352 45.93 atmosphere 1015.0 720 < th dose independent rect. 2 10
353 45.93 precipitation 0.1 720 < th dose independent rect. 1 20
354 45.93 precipitation 0.1 720 < th dose dependent rect. 1 20
356 45.95 wind 7.0 720 < th dose independent rect. 1 4
360 45.96 temperature 15.0 90 > th dose independent rect. 5 23
370 46.01 atmosphere 1015.0 90 < th dose dependent rect. 4 1
393 46.12 wind 5.0 90 < th dose independent rect. 15 15
395 46.12 atmosphere 1015.0 90 < th dose dependent rect. 3 3
400 46.13 wind 9.0 90 < th dose dependent rect. 17 13
402 46.14 humidity 60.0 14400 > th dose independent rect. 3 4
405 46.16 atmosphere 995.0 270 > th dose independent rect. 16 13
407 46.17 atmosphere 1015.0 10 < th dose dependent rect. 4 2
425 46.22 humidity 50.0 10 > th dose dependent rect. 3 3
431 46.24 temperature 10.0 720 > th dose independent rect. 13 4
432 46.24 atmosphere 1015.0 720 < th dose independent rect. 13 4
433 46.24 radiation 10.0 720 < th dose independent rect. 1 4
442 46.24 temperature 10.0 720 > th dose independent rect. 17 20
449 46.25 atmosphere 995.0 90 > th dose independent rect. 18 12
457 46.27 wind 9.0 270 < th dose independent rect. 1 12
460 46.28 temperature 10.0 720 > th dose independent rect. 1 4
461 46.28 temperature 30.0 720 < th dose independent rect. 1 4
462 46.28 humidity 50.0 720 > th dose independent rect. 1 4
465 46.28 atmosphere 995.0 720 > th dose independent rect. 1 4
471 46.28 temperature 10.0 720 > th dose independent rect. 5 20
472 46.28 humidity 90.0 720 < th dose dependent rect. 18 3
473 46.28 radiation 10.0 720 < th dose dependent rect. 1 4
498 46.40 temperature 15.0 720 > th dose independent rect. 9 11
508 46.44 humidity 60.0 10 > th dose independent rect. 18 12
517 46.45 temperature 10.0 90 > th dose independent rect. 4 1
519 46.45 temperature 30.0 90 < th dose independent rect. 4 1
520 46.45 humidity 50.0 90 > th dose independent rect. 4 1
523 46.45 atmosphere 995.0 90 > th dose independent rect. 4 1
524 46.45 atmosphere 1010.0 90 < th dose independent rect. 4 1
526 46.45 radiation 20.0 90 < th dose independent rect. 4 1
542 46.47 temperature 10.0 270 > th dose independent rect. 13 12
543 46.47 atmosphere 995.0 270 > th dose independent rect. 1 12
544 46.47 atmosphere 1015.0 270 < th dose independent rect. 1 12
545 46.47 radiation 40.0 90 < th dose dependent rect. 4 1
563 46.48 humidity 50.0 720 > th dose independent rect. 17 4
580 46.51 temperature 30.0 1440 < th dose independent rect. 19 12
586 46.51 atmosphere 995.0 1440 > th dose independent rect. 19 12
593 46.52 radiation 1.0 90 < th dose independent rect. 4 1
607 46.54 atmosphere 1015.0 720 < th dose independent rect. 24 14
613 46.56 humidity 50.0 90 > th dose dependent rect. 4 1
650 46.62 radiation 40.0 720 < th dose independent rect. 21 11
653 46.62 atmosphere 1015.0 10 < th dose independent rect. 6 21
657 46.63 wind 9.0 720 < th dose independent rect. 2 10
665 46.66 humidity 50.0 720 > th dose independent rect. 18 1
666 46.66 atmosphere 1015.0 720 < th dose independent rect. 18 1
667 46.66 radiation 20.0 720 < th dose independent rect. 18 1
676 46.66 wind 9.0 720 < th dose independent rect. 8 13
679 46.66 atmosphere 995.0 10 > th dose independent rect. 6 21
680 46.66 temperature 10.0 720 > th dose independent rect. 19 23
686 46.68 wind 9.0 720 < th dose independent rect. 9 11
687 46.69 wind 7.0 720 < th dose independent rect. 6 1
689 46.69 temperature 10.0 720 > th dose independent rect. 6 1
690 46.69 temperature 30.0 720 < th dose independent rect. 6 1
691 46.69 humidity 50.0 720 > th dose independent rect. 6 1
693 46.69 atmosphere 995.0 720 > th dose independent rect. 6 1
694 46.69 atmosphere 1015.0 720 < th dose independent rect. 6 1
695 46.69 radiation 30.0 720 < th dose independent rect. 6 1
698 46.69 temperature 10.0 720 > th dose independent rect. 21 11
699 46.69 temperature 30.0 720 < th dose independent rect. 21 11
700 46.69 humidity 50.0 720 > th dose independent rect. 21 11
702 46.69 atmosphere 995.0 720 > th dose independent rect. 21 11
703 46.69 atmosphere 1015.0 720 < th dose independent rect. 9 11
708 46.69 temperature 10.0 720 > th dose independent rect. 7 23
743 46.73 precipitation 0.1 10 < th dose independent rect. 18 12
748 46.73 precipitation 0.1 10 < th dose dependent rect. 18 12
758 46.76 humidity 70.0 720 > th dose independent rect. 19 7
779 46.78 wind 9.0 720 < th dose independent rect. 24 14
784 46.79 wind 9.0 270 < th dose independent rect. 13 12
797 46.81 temperature 10.0 720 > th dose independent rect. 2 10
798 46.81 atmosphere 995.0 720 > th dose independent rect. 2 10
799 46.81 temperature 10.0 720 > th dose independent rect. 12 14
808 46.83 precipitation 0.1 720 < th dose independent rect. 6 1
811 46.83 precipitation 0.1 720 < th dose dependent rect. 6 1
813 46.84 humidity 80.0 720 < th dose independent rect. 18 3
834 46.85 temperature 15.0 720 > th dose independent rect. 8 6
855 46.86 wind 9.0 90 < th dose dependent rect. 3 12
878 46.93 temperature 10.0 720 > th dose independent rect. 14 10
880 46.93 temperature 10.0 720 > th dose independent rect. 24 14
881 46.93 atmosphere 995.0 720 > th dose independent rect. 24 14
889 46.95 humidity 50.0 10 > th dose independent rect. 6 21
892 46.96 wind 1.0 270 > th dose independent rect. 4 12
894 46.96 radiation 40.0 720 < th dose dependent rect. 18 1
928 47.00 wind 9.0 720 < th dose independent rect. 21 11
940 47.00 wind 9.0 10 < th dose dependent rect. 18 12
947 47.01 wind 9.0 90 < th dose dependent rect. 3 18
962 47.03 wind 1.0 90 > th dose independent rect. 6 12
964 47.03 wind 9.0 720 < th dose independent rect. 20 13
965 47.03 atmosphere 1015.0 720 < th dose independent rect. 8 13