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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os09g0119600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 4.87 (0.0394) R2 : 0.652
β1 : -3.87 (0.144) R2dD : 0.57 R2D : 0.527
β2 : 1.25 (0.102) R2dC : 0.114 R2C : 0.0982
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.322 (0.0842) R2dN8 : 0.015 R2N8 : -0.0216
σ : 0.741
deviance : 250.57
__
_____
C
peak time of C : 5.09
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
231.11 0.714 4.85 -3.91 0.961 0.907 -0.703 -1.82 -0.177 5.5 91.96 77 -- --
235.39 0.715 4.85 -3.91 0.92 0.748 -1.02 -- -0.186 5.41 90.49 110 -- --
232.08 0.71 4.85 -3.9 0.982 0.846 -- -1.98 -0.179 5.34 91.99 80 -- --
239.57 0.721 4.84 -3.94 0.932 0.685 -- -- -0.183 5.46 89.39 107 -- --
265.67 0.759 4.85 -3.94 -- 1.39 -- -1.57 -0.0703 -- 89.47 149 -- --
248.55 0.739 4.87 -3.87 1.25 -- -0.896 -- -0.326 5.13 -- -- -- --
250.57 0.741 4.87 -3.87 1.25 -- -- -- -0.322 5.09 -- -- -- --
269.6 0.765 4.84 -3.99 -- 1.25 -- -- -0.0779 -- 88.33 146 -- --
644.18 1.18 4.76 -- 1.05 0.284 -- -- 0.166 5.37 89.68 104 -- --
332.26 0.852 4.88 -3.83 -- -- -- -- -0.29 -- -- -- -- --
645.97 1.19 4.77 -- 1.18 -- -- -- 0.109 5.2 -- -- -- --
682.24 1.22 4.77 -- -- 0.785 -- -- 0.218 -- 75.93 96 -- --
718.92 1.25 4.79 -- -- -- -- -- 0.134 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 229.25 humidity 90 90 > th dose dependent rect. 20 11
2 229.35 humidity 60 90 > th dose dependent rect. 19 11
14 230.14 humidity 90 30 > th dose dependent rect. 3 20
19 230.28 wind 9 4320 < th dose independent rect. 23 5
26 230.44 humidity 90 90 > th dose dependent rect. 1 22
55 231.09 humidity 90 90 > th dose dependent sin 9 NA
61 231.25 humidity 90 30 > th dose independent rect. 3 3
87 231.54 humidity 50 270 > th dose dependent rect. 17 12
137 232.13 humidity 90 90 > th dose dependent rect. 3 4
141 232.17 humidity 90 270 < th dose independent rect. 21 11
149 232.30 humidity 90 90 > th dose independent rect. 20 11
158 232.38 humidity 90 90 > th dose dependent rect. 1 6
202 232.67 humidity 90 90 > th dose dependent no NA NA
248 233.07 wind 3 1440 > th dose dependent rect. 5 3
261 233.14 radiation 20 30 < th dose independent rect. 6 21
268 233.18 wind 5 270 < th dose independent rect. 21 12
270 233.18 radiation 40 30 < th dose dependent rect. 6 21
284 233.30 humidity 90 90 > th dose independent sin 8 NA
290 233.31 humidity 90 90 > th dose dependent rect. 23 8
293 233.32 wind 3 1440 > th dose dependent rect. 2 6
319 233.41 wind 1 43200 < th dose dependent rect. 1 2
347 233.49 humidity 90 90 > th dose independent rect. 20 15
373 233.57 wind 1 43200 < th dose dependent rect. 24 6
381 233.60 humidity 90 90 < th dose independent rect. 1 8
453 233.95 wind 1 43200 > th dose independent rect. 2 7
465 234.02 wind 1 43200 < th dose independent rect. 24 4
494 234.11 wind 1 43200 < th dose independent rect. 24 9
497 234.12 wind 1 43200 < th dose independent rect. 24 7
585 234.44 wind 9 4320 < th dose independent rect. 23 10
604 234.50 wind 1 14400 > th dose independent rect. 2 2
605 234.50 wind 5 1440 < th dose independent rect. 2 6
612 234.52 wind 1 43200 > th dose independent rect. 24 6
625 234.57 wind 1 43200 < th dose independent rect. 2 7
631 234.60 wind 3 1440 > th dose independent rect. 2 6
637 234.61 humidity 90 270 < th dose independent rect. 13 19
647 234.67 wind 7 720 < th dose independent rect. 22 10
653 234.71 humidity 90 90 < th dose independent sin 9 NA
660 234.73 wind 7 720 < th dose independent rect. 20 14
674 234.81 wind 1 43200 < th dose independent rect. 4 5
696 234.91 radiation 1 720 < th dose independent rect. 14 15
707 234.93 wind 3 1440 > th dose independent rect. 5 2
714 234.94 humidity 90 270 < th dose independent rect. 15 17
719 234.96 wind 3 1440 > th dose independent rect. 4 4
720 234.98 humidity 90 90 > th dose independent rect. 3 20
736 235.01 wind 1 14400 < th dose independent rect. 2 2
778 235.12 radiation 1 720 > th dose independent rect. 6 11
791 235.17 wind 7 720 < th dose independent rect. 21 6
820 235.23 humidity 90 90 < th dose independent rect. 13 22
821 235.23 wind 1 43200 < th dose dependent rect. 5 1
828 235.25 humidity 90 90 < th dose independent rect. 21 22
834 235.26 wind 9 4320 > th dose dependent rect. 22 8
840 235.27 wind 9 4320 > th dose independent rect. 22 8
846 235.27 radiation 1 720 > th dose independent rect. 15 18
866 235.34 radiation 20 30 < th dose independent rect. 10 17
884 235.39 radiation 1 720 < th dose independent rect. 3 18
898 235.43 wind 5 1440 < th dose independent rect. 5 3
911 235.45 wind 1 43200 > th dose independent rect. 24 4
916 235.46 wind 9 4320 > th dose independent rect. 23 5
924 235.47 atmosphere 1005 270 > th dose dependent rect. 22 10
929 235.48 wind 1 43200 < th dose dependent rect. 24 4
944 235.52 humidity 80 4320 > th dose independent rect. 21 2
981 235.64 wind 1 43200 < th dose independent rect. 5 2
991 235.66 atmosphere 1015 30 < th dose dependent rect. 3 10