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Os09g0116400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Armadillo-like helical domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.9 (0.0178) R2 : 0.554
β1 : 0.782 (0.065) R2dD : 0.147 R2D : 0.117
β2 : 0.958 (0.046) R2dC : 0.426 R2C : 0.406
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.15 (0.0379) R2dN8 : 0.0205 R2N8 : -0.00785
σ : 0.334
deviance : 50.82
__
_____
C
peak time of C : 16.9
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
44.24 0.313 10.9 0.754 0.904 -0.413 0.534 -0.136 0.151 18.5 16.94 10 -- --
44.34 0.31 10.9 0.759 0.905 -0.409 0.502 -- 0.152 18.4 16.79 10 -- --
44.93 0.312 10.9 0.75 0.906 -0.406 -- -0.0787 0.154 18.4 16.87 10 -- --
44.96 0.312 10.9 0.754 0.906 -0.407 -- -- 0.154 18.4 16.86 10 -- --
56.78 0.351 10.9 0.918 -- -0.765 -- -1.04 0.0236 -- 0.01 582 -- --
50.25 0.332 10.9 0.78 0.956 -- 0.474 -- 0.148 16.9 -- -- -- --
50.82 0.334 10.9 0.782 0.958 -- -- -- 0.15 16.9 -- -- -- --
53.61 0.341 10.9 0.682 -- -1.01 -- -- 0.0968 -- 0.04368 617 -- --
60.04 0.361 10.9 -- 0.877 -0.47 -- -- 0.114 18.7 16.46 10 -- --
99.21 0.465 10.9 0.746 -- -- -- -- 0.125 -- -- -- -- --
66.92 0.383 10.9 -- 0.945 -- -- -- 0.0628 17 -- -- -- --
65.8 0.378 10.9 -- -- -1.04 -- -- 0.0576 -- 2.279e-06 615 -- --
113.9 0.498 10.9 -- -- -- -- -- 0.0424 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 36.22 temperature 10.0 90 > th dose dependent rect. 8 6
3 36.57 temperature 15.0 270 > th dose dependent rect. 8 2
8 36.81 temperature 10.0 10 > th dose dependent rect. 8 7
10 36.82 temperature 10.0 270 > th dose dependent rect. 6 7
12 36.85 wind 5.0 90 < th dose independent rect. 3 5
25 37.14 wind 5.0 270 < th dose independent rect. 3 2
28 37.21 precipitation 0.1 90 < th dose independent rect. 3 5
29 37.21 precipitation 0.1 90 < th dose dependent rect. 3 5
38 37.41 wind 9.0 90 < th dose independent rect. 8 19
42 37.48 wind 9.0 90 < th dose dependent rect. 3 5
44 37.50 temperature 10.0 90 > th dose independent rect. 3 5
46 37.50 temperature 30.0 90 < th dose independent rect. 3 5
47 37.50 humidity 50.0 90 > th dose independent rect. 3 5
49 37.50 atmosphere 995.0 90 > th dose independent rect. 3 5
50 37.50 atmosphere 1015.0 90 < th dose independent rect. 3 5
51 37.50 temperature 10.0 90 > th dose independent rect. 8 19
53 37.52 precipitation 0.1 270 < th dose independent rect. 3 2
54 37.52 precipitation 0.1 270 < th dose dependent rect. 3 2
56 37.57 temperature 15.0 90 > th dose independent rect. 15 17
60 37.60 radiation 40.0 90 < th dose independent rect. 3 5
66 37.77 wind 5.0 270 < th dose independent rect. 1 6
67 37.79 wind 9.0 270 < th dose dependent rect. 3 2
68 37.80 precipitation 0.1 90 < th dose independent rect. 8 19
69 37.80 precipitation 0.1 90 < th dose dependent rect. 8 19
70 37.84 wind 9.0 270 < th dose independent rect. 5 22
77 37.93 temperature 10.0 90 > th dose dependent rect. 3 5
79 37.94 temperature 10.0 270 > th dose independent rect. 3 2
81 37.94 temperature 30.0 270 < th dose independent rect. 3 2
82 37.94 humidity 50.0 270 > th dose independent rect. 3 2
85 37.94 atmosphere 995.0 270 > th dose independent rect. 3 2
86 37.94 atmosphere 1010.0 270 < th dose independent rect. 3 2
88 37.94 radiation 20.0 270 < th dose independent rect. 3 2
91 37.94 temperature 10.0 270 > th dose independent rect. 5 22
92 37.96 radiation 40.0 270 < th dose dependent rect. 3 2
101 38.02 radiation 1.0 270 < th dose independent rect. 3 2
112 38.07 temperature 15.0 10 > th dose independent rect. 15 17
118 38.13 atmosphere 995.0 90 > th dose independent rect. 8 19
121 38.17 radiation 40.0 90 < th dose independent rect. 13 19
168 38.40 precipitation 0.1 90 < th dose independent rect. 8 7
169 38.40 precipitation 0.1 90 < th dose dependent rect. 8 7
174 38.43 radiation 20.0 270 < th dose dependent rect. 2 5
180 38.48 precipitation 0.1 270 < th dose independent rect. 1 6
183 38.48 precipitation 0.1 270 < th dose dependent rect. 1 6
185 38.49 temperature 10.0 90 > th dose independent rect. 8 7
186 38.49 atmosphere 1015.0 90 < th dose independent rect. 8 7
192 38.51 atmosphere 995.0 90 > th dose independent rect. 8 6
196 38.52 wind 9.0 90 < th dose independent rect. 8 7
208 38.57 wind 1.0 90 > th dose independent rect. 8 6
213 38.60 humidity 50.0 90 > th dose independent rect. 8 6
218 38.62 precipitation 0.1 90 < th dose independent rect. 15 17
224 38.62 precipitation 0.1 90 < th dose dependent rect. 15 17
234 38.69 wind 9.0 90 < th dose independent rect. 15 17
242 38.71 radiation 1.0 90 > th dose independent rect. 8 6
247 38.74 radiation 10.0 270 < th dose independent rect. 1 7
258 38.77 temperature 15.0 270 > th dose independent rect. 11 10
260 38.78 temperature 10.0 270 > th dose independent rect. 1 6
262 38.78 temperature 30.0 270 < th dose independent rect. 1 6
263 38.78 humidity 50.0 270 > th dose independent rect. 1 6
265 38.78 atmosphere 995.0 270 > th dose independent rect. 1 6
267 38.78 radiation 40.0 270 < th dose independent rect. 1 6
274 38.81 precipitation 0.1 10 < th dose independent rect. 3 5
278 38.81 precipitation 0.1 10 < th dose dependent rect. 3 5
292 38.85 temperature 10.0 10 > th dose dependent rect. 3 5
295 38.86 temperature 10.0 270 > th dose dependent rect. 3 3
320 38.89 humidity 50.0 270 > th dose dependent rect. 3 2
332 38.91 precipitation 0.1 270 < th dose independent rect. 6 20
334 38.91 precipitation 0.1 270 < th dose dependent rect. 6 20
353 38.95 precipitation 0.1 10 < th dose independent rect. 15 17
356 38.95 precipitation 0.1 10 < th dose dependent rect. 15 17
366 38.96 temperature 10.0 10 > th dose independent rect. 8 7
368 38.96 atmosphere 995.0 10 > th dose independent rect. 8 7
369 38.96 atmosphere 1015.0 10 < th dose independent rect. 8 7
370 38.96 precipitation 0.1 10 < th dose independent rect. 8 7
372 38.96 atmosphere 1010.0 90 < th dose independent rect. 14 18
376 38.96 precipitation 0.1 10 < th dose dependent rect. 8 7
400 39.00 wind 7.0 270 < th dose independent rect. 6 7
422 39.01 radiation 1.0 10 > th dose independent rect. 8 7
423 39.01 temperature 15.0 270 > th dose independent rect. 11 20
426 39.02 atmosphere 995.0 90 > th dose independent rect. 14 18
430 39.04 temperature 10.0 1440 > th dose independent rect. 9 7
433 39.04 temperature 10.0 1440 > th dose independent rect. 16 17
447 39.06 wind 9.0 10 < th dose independent rect. 8 7
457 39.08 wind 5.0 270 < th dose independent rect. 8 2
460 39.08 humidity 50.0 90 > th dose independent rect. 8 19
480 39.12 humidity 50.0 270 > th dose independent rect. 6 7
502 39.15 atmosphere 1015.0 270 < th dose dependent rect. 3 2
514 39.18 atmosphere 995.0 270 > th dose independent rect. 6 20
515 39.19 humidity 50.0 10 > th dose independent rect. 8 6
540 39.22 wind 9.0 10 < th dose dependent rect. 4 4
549 39.25 humidity 50.0 270 > th dose independent rect. 21 14
568 39.28 precipitation 0.1 270 < th dose independent rect. 6 7
572 39.28 precipitation 0.1 270 < th dose dependent rect. 6 7
576 39.29 temperature 10.0 270 > th dose independent rect. 6 7
577 39.29 atmosphere 995.0 270 > th dose independent rect. 6 7
578 39.29 atmosphere 1015.0 270 < th dose independent rect. 6 7
582 39.29 atmosphere 995.0 90 > th dose dependent rect. 3 5
600 39.32 wind 1.0 270 > th dose independent rect. 8 2
621 39.35 wind 1.0 270 > th dose independent rect. 3 2
632 39.37 wind 1.0 90 > th dose independent rect. 8 19
642 39.40 atmosphere 1015.0 270 < th dose independent rect. 11 10
658 39.42 temperature 10.0 270 > th dose independent rect. 21 14
659 39.42 atmosphere 995.0 270 > th dose independent rect. 21 14
664 39.42 wind 9.0 270 < th dose dependent rect. 7 6
687 39.45 wind 9.0 270 < th dose independent rect. 21 14
688 39.45 atmosphere 995.0 10 > th dose independent rect. 15 17
695 39.46 wind 5.0 270 < th dose independent rect. 7 4
709 39.47 radiation 40.0 10 < th dose independent rect. 12 20
718 39.50 precipitation 0.1 270 < th dose independent rect. 11 10
720 39.50 humidity 50.0 10 > th dose independent rect. 8 20
722 39.50 wind 9.0 270 < th dose dependent rect. 7 4
723 39.50 precipitation 0.1 270 < th dose dependent rect. 11 10
728 39.52 precipitation 0.1 270 < th dose independent rect. 2 15
730 39.52 precipitation 0.1 270 < th dose dependent rect. 2 15
734 39.53 precipitation 0.1 270 < th dose independent rect. 10 22
737 39.53 precipitation 0.1 270 < th dose dependent rect. 10 22
769 39.57 temperature 10.0 90 > th dose dependent rect. 8 19
786 39.60 humidity 50.0 90 > th dose independent rect. 15 17
806 39.63 atmosphere 1015.0 90 < th dose independent rect. 8 19
811 39.64 radiation 10.0 270 < th dose dependent rect. 2 11
812 39.65 humidity 50.0 270 > th dose independent rect. 8 2
815 39.65 humidity 90.0 90 < th dose independent rect. 8 6
819 39.65 atmosphere 1015.0 90 < th dose dependent rect. 3 5
842 39.68 humidity 50.0 270 > th dose dependent rect. 18 8
846 39.69 wind 1.0 270 > th dose independent rect. 11 10
851 39.70 precipitation 0.1 270 < th dose independent rect. 8 2
853 39.70 precipitation 0.1 270 < th dose dependent rect. 8 2
863 39.72 temperature 10.0 270 > th dose independent rect. 8 2
864 39.72 atmosphere 995.0 270 > th dose independent rect. 8 2
865 39.72 atmosphere 1015.0 270 < th dose independent rect. 8 2
868 39.72 wind 9.0 270 < th dose dependent rect. 8 2
871 39.72 wind 9.0 90 < th dose dependent rect. 15 17
874 39.73 precipitation 0.1 270 < th dose independent rect. 11 20
876 39.73 precipitation 0.1 270 < th dose dependent rect. 11 20
879 39.75 radiation 1.0 270 > th dose independent rect. 8 2
924 39.80 wind 9.0 1440 < th dose independent rect. 4 5
925 39.80 temperature 10.0 1440 > th dose independent rect. 4 5
928 39.80 humidity 50.0 1440 > th dose independent rect. 4 5
930 39.80 atmosphere 995.0 1440 > th dose independent rect. 4 5
931 39.80 atmosphere 1015.0 1440 < th dose independent rect. 4 5
943 39.80 temperature 10.0 1440 > th dose independent rect. 9 19
953 39.81 wind 1.0 270 > th dose independent rect. 2 4
956 39.81 wind 9.0 270 < th dose independent rect. 17 9
984 39.84 temperature 10.0 270 > th dose independent rect. 17 9
985 39.84 radiation 20.0 270 < th dose independent rect. 17 9
988 39.84 temperature 10.0 270 > th dose independent rect. 2 15
989 39.84 atmosphere 1015.0 270 < th dose independent rect. 2 15
999 39.85 radiation 40.0 270 < th dose dependent rect. 17 9