Os09g0115300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0115300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 61.57 | 0.369 | 2.9 | -0.0828 | 0.197 | -0.231 | -0.13 | 0.72 | 0.0103 | 8.81 | 68.5 | 877 | -- | -- |
| 62.19 | 0.367 | 2.9 | -0.0288 | 0.188 | -0.211 | 0.159 | -- | 0.0211 | 8.83 | 69.38 | 902 | -- | -- |
| 61.6 | 0.366 | 2.9 | -0.0797 | 0.188 | -0.229 | -- | 0.672 | 0.0103 | 8.84 | 68.55 | 907 | -- | -- |
| 62.27 | 0.368 | 2.9 | -0.0209 | 0.189 | -0.211 | -- | -- | 0.0226 | 8.78 | 69.37 | 891 | -- | -- |
| 62.6 | 0.368 | 2.9 | -0.0951 | -- | -0.2 | -- | 0.695 | 0.0121 | -- | 73 | 1276 | -- | -- |
| 62.86 | 0.372 | 2.89 | -0.0258 | 0.105 | -- | 0.133 | -- | 0.0421 | 8.17 | -- | -- | -- | -- |
| 62.91 | 0.371 | 2.89 | -0.0223 | 0.106 | -- | -- | -- | 0.0419 | 7.92 | -- | -- | -- | -- |
| 62.99 | 0.37 | 2.9 | -0.0166 | -- | -0.191 | -- | -- | 0.0221 | -- | 71.99 | 1366 | -- | -- |
| 62.28 | 0.368 | 2.9 | -- | 0.196 | -0.211 | -- | -- | 0.025 | 8.67 | 70.12 | 856 | -- | -- |
| 63.52 | 0.372 | 2.9 | -0.0211 | -- | -- | -- | -- | 0.0433 | -- | -- | -- | -- | -- |
| 62.93 | 0.371 | 2.89 | -- | 0.106 | -- | -- | -- | 0.0443 | 7.94 | -- | -- | -- | -- |
| 63 | 0.37 | 2.9 | -- | -- | -0.192 | -- | -- | 0.0238 | -- | 72 | 1366 | -- | -- |
| 63.53 | 0.372 | 2.9 | -- | -- | -- | -- | -- | 0.0456 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 54.76 | humidity | 80 | 30 | < th | dose independent | rect. | 1 | 1 |
| 7 | 54.76 | humidity | 80 | 30 | < th | dose dependent | rect. | 1 | 1 |
| 40 | 57.76 | humidity | 80 | 720 | < th | dose independent | rect. | 1 | 1 |
| 44 | 57.76 | humidity | 80 | 720 | < th | dose dependent | rect. | 1 | 1 |
| 48 | 57.78 | humidity | 80 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 59 | 58.63 | humidity | 60 | 1440 | > th | dose independent | rect. | 6 | 3 |
| 63 | 58.76 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 1 | 1 |
| 70 | 58.93 | humidity | 60 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 83 | 58.94 | humidity | 60 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 97 | 58.99 | humidity | 60 | 270 | < th | dose independent | rect. | 8 | 1 |
| 123 | 58.99 | humidity | 60 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 150 | 59.03 | humidity | 60 | 1440 | > th | dose independent | rect. | 22 | 11 |
| 168 | 59.16 | temperature | 20 | 90 | < th | dose independent | rect. | 1 | 1 |
| 180 | 59.26 | humidity | 60 | 1440 | > th | dose independent | rect. | 20 | 13 |
| 293 | 59.62 | radiation | 40 | 10 | > th | dose dependent | rect. | 9 | 1 |
| 314 | 59.64 | humidity | 60 | 90 | < th | dose independent | rect. | 17 | 17 |
| 315 | 59.65 | humidity | 60 | 10 | < th | dose independent | rect. | 17 | 17 |
| 318 | 59.65 | humidity | 60 | 90 | < th | dose dependent | rect. | 17 | 17 |
| 324 | 59.67 | humidity | 60 | 10 | < th | dose independent | rect. | 9 | 1 |
| 359 | 59.67 | wind | 1 | 10 | < th | dose dependent | rect. | 7 | 3 |
| 396 | 59.68 | humidity | 60 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 471 | 59.68 | humidity | 60 | 10 | < th | dose dependent | rect. | 17 | 17 |
| 530 | 59.71 | wind | 1 | 10 | < th | dose dependent | rect. | 7 | 6 |
| 540 | 59.72 | wind | 1 | 10 | < th | dose independent | rect. | 8 | 2 |
| 621 | 59.88 | radiation | 40 | 10 | > th | dose dependent | sin | 12 | NA |
| 625 | 59.90 | radiation | 40 | 10 | > th | dose independent | rect. | 9 | 1 |
| 983 | 60.29 | wind | 1 | 720 | < th | dose dependent | rect. | 1 | 1 |