Os09g0112000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0112000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 169.08 | 0.611 | 7.2 | 0.824 | 0.559 | -1.32 | 0.781 | 5.89 | 0.357 | 3.39 | 21.76 | 369 | -- | -- |
| 185.54 | 0.634 | 7.32 | -0.223 | 1.05 | -0.911 | -0.237 | -- | 0.0432 | 4.15 | 10.27 | 1195 | -- | -- |
| 170.79 | 0.609 | 7.2 | 0.81 | 0.57 | -1.34 | -- | 5.8 | 0.354 | 3.23 | 21.83 | 395 | -- | -- |
| 185.7 | 0.635 | 7.32 | -0.238 | 1.05 | -0.925 | -- | -- | 0.0412 | 4.08 | 11.8 | 1172 | -- | -- |
| 181.86 | 0.628 | 7.2 | 0.795 | -- | -1.75 | -- | 5.61 | 0.393 | -- | 22.25 | 274 | -- | -- |
| 198.9 | 0.661 | 7.36 | -0.515 | 0.976 | -- | -0.357 | -- | -0.123 | 4.47 | -- | -- | -- | -- |
| 199.23 | 0.661 | 7.35 | -0.513 | 0.973 | -- | -- | -- | -0.121 | 4.42 | -- | -- | -- | -- |
| 200.32 | 0.659 | 7.32 | -0.207 | -- | -1.36 | -- | -- | 0.102 | -- | 22.34 | 203 | -- | -- |
| 187 | 0.637 | 7.31 | -- | 1.05 | -1.01 | -- | -- | 0.08 | 4.1 | 12.72 | 1201 | -- | -- |
| 249.99 | 0.739 | 7.36 | -0.475 | -- | -- | -- | -- | -0.0953 | -- | -- | -- | -- | -- |
| 206.16 | 0.672 | 7.34 | -- | 0.963 | -- | -- | -- | -0.0639 | 4.43 | -- | -- | -- | -- |
| 201.4 | 0.661 | 7.31 | -- | -- | -1.41 | -- | -- | 0.135 | -- | 22.1 | 203 | -- | -- |
| 255.93 | 0.747 | 7.35 | -- | -- | -- | -- | -- | -0.0427 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 166.92 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 2 | 167.01 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 9 | 167.75 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 13 |
| 10 | 167.76 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 2 |
| 16 | 167.96 | wind | 1 | 43200 | < th | dose dependent | rect. | 23 | 3 |
| 29 | 168.16 | radiation | 40 | 43200 | > th | dose independent | rect. | 10 | 2 |
| 39 | 168.37 | radiation | 40 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 46 | 168.45 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 59 | 168.66 | wind | 1 | 43200 | < th | dose dependent | rect. | 21 | 5 |
| 67 | 168.72 | humidity | 90 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 73 | 168.76 | temperature | 20 | 1440 | > th | dose dependent | sin | 11 | NA |
| 75 | 168.77 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 95 | 168.84 | wind | 1 | 43200 | < th | dose independent | rect. | 23 | 3 |
| 100 | 168.85 | wind | 1 | 43200 | < th | dose dependent | rect. | 19 | 7 |
| 164 | 169.01 | radiation | 10 | 43200 | > th | dose dependent | rect. | 6 | 6 |
| 182 | 169.03 | radiation | 30 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 183 | 169.03 | radiation | 20 | 43200 | > th | dose independent | rect. | 7 | 3 |
| 246 | 169.10 | wind | 1 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 252 | 169.12 | radiation | 20 | 43200 | < th | dose independent | rect. | 8 | 4 |
| 256 | 169.14 | radiation | 20 | 43200 | < th | dose independent | rect. | 5 | 8 |
| 268 | 169.14 | radiation | 10 | 43200 | > th | dose dependent | sin | 8 | NA |
| 306 | 169.20 | radiation | 40 | 43200 | > th | dose independent | sin | 8 | NA |
| 307 | 169.20 | radiation | 20 | 43200 | < th | dose independent | sin | 7 | NA |
| 426 | 169.25 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 2 |
| 480 | 169.29 | wind | 3 | 43200 | > th | dose independent | rect. | 11 | 3 |
| 520 | 169.34 | radiation | 30 | 43200 | < th | dose independent | rect. | 11 | 2 |
| 547 | 169.36 | temperature | 20 | 270 | > th | dose dependent | rect. | 12 | 22 |
| 591 | 169.45 | humidity | 90 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 805 | 169.57 | wind | 1 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 828 | 169.58 | humidity | 90 | 43200 | > th | dose dependent | rect. | 2 | 14 |
| 831 | 169.59 | radiation | 40 | 43200 | > th | dose dependent | sin | 3 | NA |
| 837 | 169.60 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 9 |
| 848 | 169.62 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 857 | 169.63 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 5 |
| 862 | 169.63 | humidity | 90 | 43200 | > th | dose dependent | rect. | 4 | 5 |
| 866 | 169.64 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 873 | 169.64 | humidity | 90 | 43200 | > th | dose dependent | sin | 4 | NA |
| 922 | 169.66 | wind | 5 | 43200 | < th | dose independent | rect. | 14 | 2 |