Os09g0110500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0110500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 208.42 | 0.678 | 5.95 | -0.378 | 0.997 | 0.817 | -0.181 | 2.67 | -0.879 | 13.6 | 79.09 | 5210 | -- | -- |
| 215.68 | 0.684 | 5.94 | -0.657 | 0.855 | 1.02 | -0.203 | -- | -0.98 | 13.9 | 75.99 | 4581 | -- | -- |
| 208.55 | 0.673 | 5.95 | -0.378 | 0.997 | 0.817 | -- | 2.72 | -0.879 | 13.6 | 79.16 | 5210 | -- | -- |
| 215.72 | 0.684 | 5.94 | -0.7 | 0.863 | 0.937 | -- | -- | -0.961 | 13.6 | 75.24 | 4647 | -- | -- |
| 237.72 | 0.722 | 5.88 | -0.792 | -- | 0.616 | -- | 0.161 | -0.675 | -- | 79.16 | 5210 | -- | -- |
| 226.08 | 0.705 | 5.87 | -0.726 | 0.949 | -- | -0.406 | -- | -0.642 | 14 | -- | -- | -- | -- |
| 226.72 | 0.705 | 5.87 | -0.738 | 0.948 | -- | -- | -- | -0.645 | 14 | -- | -- | -- | -- |
| 237.89 | 0.721 | 5.88 | -0.797 | -- | 0.616 | -- | -- | -0.677 | -- | 79.16 | 5210 | -- | -- |
| 228.83 | 0.705 | 5.92 | -- | 0.86 | 1.02 | -- | -- | -0.904 | 13.6 | 74 | 4658 | -- | -- |
| 280.87 | 0.783 | 5.88 | -0.777 | -- | -- | -- | -- | -0.667 | -- | -- | -- | -- | -- |
| 241.07 | 0.726 | 5.85 | -- | 0.962 | -- | -- | -- | -0.563 | 14 | -- | -- | -- | -- |
| 254.65 | 0.746 | 5.86 | -- | -- | 0.61 | -- | -- | -0.588 | -- | 79.16 | 5210 | -- | -- |
| 296.81 | 0.804 | 5.86 | -- | -- | -- | -- | -- | -0.581 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 198.04 | temperature | 20 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 24 | 199.25 | wind | 1 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 25 | 199.25 | temperature | 25 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 75 | 200.15 | temperature | 20 | 270 | > th | dose dependent | rect. | 1 | 8 |
| 85 | 200.29 | temperature | 25 | 14400 | > th | dose independent | rect. | 6 | 8 |
| 95 | 200.36 | temperature | 25 | 14400 | > th | dose independent | rect. | 1 | 14 |
| 97 | 200.37 | temperature | 20 | 14400 | > th | dose dependent | sin | 2 | NA |
| 122 | 200.50 | temperature | 25 | 14400 | < th | dose independent | rect. | 6 | 8 |
| 130 | 200.54 | temperature | 25 | 14400 | < th | dose independent | rect. | 3 | 11 |
| 180 | 200.75 | wind | 3 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 196 | 200.80 | temperature | 25 | 14400 | > th | dose independent | sin | 4 | NA |
| 200 | 200.81 | temperature | 25 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 221 | 200.88 | temperature | 30 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 272 | 201.05 | wind | 1 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 280 | 201.09 | temperature | 25 | 14400 | < th | dose independent | sin | 3 | NA |
| 349 | 201.29 | temperature | 25 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 384 | 201.39 | temperature | 25 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 536 | 201.76 | temperature | 25 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 627 | 201.92 | temperature | 20 | 14400 | > th | dose dependent | no | NA | NA |
| 647 | 201.97 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 6 |
| 682 | 202.06 | temperature | 20 | 14400 | > th | dose dependent | rect. | 12 | 23 |
| 712 | 202.13 | temperature | 20 | 14400 | > th | dose dependent | rect. | 10 | 23 |
| 784 | 202.31 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 930 | 202.65 | temperature | 25 | 14400 | > th | dose independent | rect. | 6 | 22 |
| 954 | 202.68 | humidity | 80 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 978 | 202.73 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 1 |