Os09g0109500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : UNC-50 family protein.
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Os09g0109500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : UNC-50 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.03 | 0.205 | 11.1 | -0.193 | 0.135 | 0.387 | -0.0342 | -0.921 | 0.204 | 23.3 | 18.4 | 2804 | -- | -- |
| 19.86 | 0.208 | 11.1 | -0.108 | 0.142 | 0.661 | -0.0536 | -- | 0.218 | 22.8 | 18.1 | 2808 | -- | -- |
| 19.03 | 0.203 | 11.1 | -0.191 | 0.134 | 0.386 | -- | -0.922 | 0.204 | 23.4 | 18.37 | 2791 | -- | -- |
| 19.86 | 0.208 | 11.1 | -0.102 | 0.135 | 0.648 | -- | -- | 0.224 | 23.2 | 18.07 | 2804 | -- | -- |
| 20.07 | 0.209 | 11.1 | -0.189 | -- | 0.389 | -- | -0.91 | 0.204 | -- | 18.3 | 2630 | -- | -- |
| 24.82 | 0.234 | 11.1 | 0.162 | 0.144 | -- | -0.058 | -- | 0.328 | 24 | -- | -- | -- | -- |
| 24.83 | 0.233 | 11.1 | 0.165 | 0.144 | -- | -- | -- | 0.329 | 23.9 | -- | -- | -- | -- |
| 20.95 | 0.213 | 11.1 | -0.0969 | -- | 0.649 | -- | -- | 0.226 | -- | 18.02 | 2659 | -- | -- |
| 20.05 | 0.209 | 11.1 | -- | 0.137 | 0.626 | -- | -- | 0.245 | 23.1 | 18 | 2810 | -- | -- |
| 26.15 | 0.239 | 11.1 | 0.169 | -- | -- | -- | -- | 0.33 | -- | -- | -- | -- | -- |
| 25.55 | 0.236 | 11.1 | -- | 0.147 | -- | -- | -- | 0.31 | 24 | -- | -- | -- | -- |
| 21.14 | 0.214 | 11.1 | -- | -- | 0.585 | -- | -- | 0.244 | -- | 18.03 | 2641 | -- | -- |
| 26.9 | 0.242 | 11.1 | -- | -- | -- | -- | -- | 0.312 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 19.08 | temperature | 15 | 4320 | < th | dose dependent | rect. | 23 | 7 |
| 6 | 19.10 | temperature | 15 | 4320 | < th | dose dependent | sin | 7 | NA |
| 33 | 19.17 | temperature | 15 | 4320 | < th | dose dependent | rect. | 24 | 4 |
| 64 | 19.25 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 17 |
| 66 | 19.25 | temperature | 20 | 1440 | < th | dose dependent | rect. | 12 | 17 |
| 68 | 19.26 | temperature | 30 | 720 | < th | dose dependent | rect. | 8 | 15 |
| 91 | 19.32 | temperature | 20 | 4320 | < th | dose independent | rect. | 19 | 3 |
| 103 | 19.34 | temperature | 30 | 720 | < th | dose dependent | sin | 21 | NA |
| 106 | 19.34 | temperature | 10 | 720 | > th | dose dependent | rect. | 9 | 15 |
| 125 | 19.38 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 4 |
| 138 | 19.40 | temperature | 20 | 1440 | < th | dose dependent | sin | 17 | NA |
| 323 | 19.65 | temperature | 20 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 358 | 19.68 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 381 | 19.70 | temperature | 15 | 4320 | < th | dose dependent | no | NA | NA |
| 417 | 19.72 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 2 |
| 426 | 19.72 | temperature | 10 | 720 | > th | dose dependent | rect. | 9 | 21 |
| 427 | 19.73 | temperature | 10 | 720 | > th | dose dependent | sin | 20 | NA |
| 445 | 19.74 | humidity | 50 | 43200 | < th | dose dependent | rect. | 20 | 12 |
| 487 | 19.77 | temperature | 10 | 720 | > th | dose dependent | rect. | 9 | 19 |
| 504 | 19.79 | temperature | 30 | 720 | < th | dose dependent | rect. | 11 | 8 |
| 517 | 19.80 | temperature | 20 | 1440 | < th | dose independent | rect. | 12 | 18 |
| 572 | 19.82 | temperature | 20 | 1440 | > th | dose independent | rect. | 12 | 18 |
| 594 | 19.83 | humidity | 50 | 43200 | > th | dose independent | rect. | 20 | 13 |
| 638 | 19.85 | humidity | 50 | 43200 | < th | dose independent | rect. | 20 | 13 |
| 718 | 19.88 | radiation | 30 | 4320 | < th | dose independent | rect. | 16 | 16 |
| 759 | 19.90 | temperature | 20 | 1440 | > th | dose independent | rect. | 12 | 15 |
| 764 | 19.90 | humidity | 50 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 791 | 19.91 | temperature | 20 | 1440 | < th | dose independent | rect. | 12 | 15 |
| 794 | 19.91 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 20 |
| 800 | 19.91 | humidity | 50 | 43200 | < th | dose dependent | rect. | 5 | 4 |
| 834 | 19.92 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 20 |