Os09g0106700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Myb proto-oncogene protein (C-myb).
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Os09g0106700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Myb proto-oncogene protein (C-myb).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 458.05 | 1.01 | 5.93 | 1.33 | 2.1 | 2.21 | -0.622 | 3.44 | -0.807 | 9.85 | 68 | 5641 | -- | -- |
| 469.65 | 1.01 | 5.91 | 1.23 | 2.24 | 2.34 | -0.855 | -- | -0.764 | 9.34 | 67.71 | 4910 | -- | -- |
| 459.53 | 0.998 | 5.93 | 1.31 | 2.1 | 2.22 | -- | 3.5 | -0.808 | 9.85 | 68 | 5641 | -- | -- |
| 470.14 | 1.01 | 5.89 | 1.17 | 2.13 | 2.4 | -- | -- | -0.715 | 9.25 | 67.57 | 4716 | -- | -- |
| 707.29 | 1.24 | 5.99 | 1.31 | -- | 2.35 | -- | 3.1 | -0.814 | -- | 67.44 | 5903 | -- | -- |
| 567.04 | 1.12 | 5.92 | 1.13 | 2.03 | -- | -0.859 | -- | -0.812 | 9.66 | -- | -- | -- | -- |
| 569.79 | 1.12 | 5.92 | 1.1 | 2.03 | -- | -- | -- | -0.814 | 9.61 | -- | -- | -- | -- |
| 721.28 | 1.25 | 5.97 | 1.27 | -- | 2.48 | -- | -- | -0.806 | -- | 67.64 | 5882 | -- | -- |
| 506.02 | 1.05 | 5.92 | -- | 2.14 | 2.36 | -- | -- | -0.845 | 9.21 | 67 | 4709 | -- | -- |
| 814.54 | 1.33 | 5.97 | 1.08 | -- | -- | -- | -- | -0.81 | -- | -- | -- | -- | -- |
| 601.62 | 1.15 | 5.95 | -- | 2.03 | -- | -- | -- | -0.937 | 9.57 | -- | -- | -- | -- |
| 759.01 | 1.28 | 6.04 | -- | -- | 2.43 | -- | -- | -1.09 | -- | 68 | 5881 | -- | -- |
| 845.45 | 1.36 | 6 | -- | -- | -- | -- | -- | -0.93 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 444.02 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 2 | 444.51 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 5 |
| 3 | 444.89 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 10 | 2 |
| 6 | 445.58 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 20 | 450.14 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 10 | 2 |
| 24 | 450.89 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 25 | 450.89 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 26 | 451.24 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 27 | 451.24 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 39 | 452.49 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 3 |
| 42 | 452.79 | wind | 1.0 | 14400 | > th | dose independent | rect. | 3 | 4 |
| 54 | 453.85 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 3 |
| 55 | 454.01 | humidity | 60.0 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 71 | 455.11 | wind | 1.0 | 14400 | < th | dose independent | rect. | 3 | 4 |
| 72 | 455.15 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 20 | 17 |
| 73 | 455.16 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 6 | 7 |
| 89 | 455.50 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 6 |
| 90 | 455.50 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 13 |
| 95 | 455.89 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 13 |
| 99 | 456.00 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 13 |
| 100 | 456.00 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 13 |
| 101 | 456.19 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 7 |
| 105 | 456.36 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 5 |
| 117 | 456.85 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 8 |
| 122 | 457.11 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 12 | 5 |
| 123 | 457.11 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 12 | 5 |
| 129 | 457.40 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 3 | 10 |
| 130 | 457.40 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 23 | 14 |
| 131 | 457.41 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 6 | 7 |
| 133 | 457.41 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 20 | 17 |
| 146 | 457.63 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 8 |
| 147 | 457.63 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 8 |
| 169 | 458.27 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 10 |
| 170 | 458.29 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 21 | 17 |
| 171 | 458.31 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 10 |
| 178 | 458.50 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 8 |
| 192 | 458.85 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 11 | 6 |
| 194 | 458.94 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 10 |
| 195 | 458.94 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 10 |
| 204 | 459.25 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 6 |
| 207 | 459.29 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 12 | 5 |
| 227 | 459.72 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 8 | 9 |
| 250 | 459.87 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 19 | 22 |
| 256 | 459.97 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 263 | 460.12 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 8 |
| 305 | 460.35 | humidity | 70.0 | 4320 | < th | dose independent | sin | 5 | NA |
| 324 | 460.54 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 5 | 9 |
| 328 | 460.63 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 11 | 23 |
| 331 | 460.69 | humidity | 60.0 | 14400 | < th | dose independent | sin | 1 | NA |
| 364 | 461.00 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 9 | 5 |
| 385 | 461.31 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 402 | 461.45 | wind | 1.0 | 14400 | < th | dose independent | rect. | 2 | 8 |
| 442 | 461.68 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 3 |
| 443 | 461.68 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 3 |
| 477 | 461.73 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 16 | 23 |
| 478 | 461.74 | humidity | 60.0 | 14400 | < th | dose independent | no | NA | NA |
| 540 | 461.79 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 16 |
| 549 | 461.80 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 16 |
| 555 | 461.80 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 16 |
| 580 | 462.02 | humidity | 80.0 | 4320 | < th | dose dependent | sin | 5 | NA |
| 666 | 462.83 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 2 |
| 681 | 463.00 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 8 | 9 |
| 697 | 463.14 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 3 | 14 |
| 698 | 463.14 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 23 | 18 |
| 710 | 463.17 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 19 | 22 |
| 716 | 463.31 | humidity | 70.0 | 4320 | > th | dose independent | sin | 6 | NA |
| 739 | 463.59 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 11 | 6 |
| 800 | 464.22 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 11 | 23 |
| 803 | 464.25 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 1 | NA |
| 814 | 464.32 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 14 | 23 |
| 815 | 464.35 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 1 | NA |
| 816 | 464.35 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 1 | NA |
| 860 | 464.53 | humidity | 60.0 | 14400 | > th | dose independent | sin | 1 | NA |
| 883 | 464.74 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 14 | 6 |
| 931 | 464.91 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 8 | 21 |
| 963 | 465.00 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 16 |
| 989 | 465.03 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 3 | 21 |
| 994 | 465.04 | humidity | 60.0 | 14400 | > th | dose independent | no | NA | NA |