Os09g0103300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0103300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 227.8 | 0.709 | 7.63 | 0.96 | 2.84 | 2.61 | 0.0599 | -2.65 | -0.73 | 0.609 | 20.8 | 2711 | -- | -- |
| 231.5 | 0.709 | 7.69 | 0.771 | 2.82 | 3.64 | 0.193 | -- | -0.795 | 0.624 | 20 | 2802 | -- | -- |
| 227.81 | 0.703 | 7.63 | 0.959 | 2.84 | 2.61 | -- | -2.65 | -0.73 | 0.61 | 20.8 | 2708 | -- | -- |
| 231.65 | 0.709 | 7.7 | 0.771 | 2.81 | 3.63 | -- | -- | -0.794 | 0.633 | 20.02 | 2790 | -- | -- |
| 638.87 | 1.18 | 7.69 | 0.241 | -- | 5.05 | -- | 1.07 | -0.908 | -- | 20.8 | 2708 | -- | -- |
| 357.34 | 0.886 | 7.81 | -0.566 | 2.73 | -- | 0.388 | -- | -1.31 | 0.495 | -- | -- | -- | -- |
| 357.99 | 0.886 | 7.82 | -0.581 | 2.73 | -- | -- | -- | -1.31 | 0.496 | -- | -- | -- | -- |
| 639.79 | 1.18 | 7.68 | 0.287 | -- | 4.78 | -- | -- | -0.902 | -- | 20.8 | 2708 | -- | -- |
| 242.45 | 0.725 | 7.73 | -- | 2.84 | 3.07 | -- | -- | -0.94 | 0.615 | 19.9 | 2680 | -- | -- |
| 826.06 | 1.34 | 7.76 | -0.486 | -- | -- | -- | -- | -1.26 | -- | -- | -- | -- | -- |
| 366.88 | 0.896 | 7.8 | -- | 2.72 | -- | -- | -- | -1.25 | 0.485 | -- | -- | -- | -- |
| 641.8 | 1.18 | 7.69 | -- | -- | 4.64 | -- | -- | -0.942 | -- | 20.8 | 2708 | -- | -- |
| 832.3 | 1.35 | 7.75 | -- | -- | -- | -- | -- | -1.21 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 230.07 | humidity | 50 | 43200 | < th | dose independent | rect. | 20 | 13 |
| 2 | 230.72 | temperature | 20 | 4320 | < th | dose dependent | rect. | 21 | 3 |
| 4 | 230.90 | humidity | 50 | 43200 | > th | dose independent | rect. | 20 | 13 |
| 5 | 230.96 | humidity | 50 | 43200 | < th | dose independent | rect. | 7 | 2 |
| 15 | 231.82 | humidity | 50 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 22 | 232.26 | radiation | 10 | 4320 | > th | dose dependent | rect. | 5 | 2 |
| 35 | 232.37 | humidity | 60 | 43200 | < th | dose dependent | rect. | 20 | 13 |
| 48 | 233.36 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 65 | 234.07 | temperature | 20 | 4320 | > th | dose independent | rect. | 17 | 5 |
| 72 | 234.32 | humidity | 60 | 43200 | > th | dose independent | rect. | 22 | 3 |
| 74 | 234.36 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 76 | 234.46 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 16 |
| 80 | 234.50 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 3 |
| 83 | 234.54 | humidity | 60 | 43200 | < th | dose dependent | rect. | 7 | 2 |
| 86 | 234.63 | temperature | 20 | 4320 | < th | dose independent | rect. | 17 | 5 |
| 94 | 234.82 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 16 |
| 95 | 234.83 | humidity | 50 | 43200 | > th | dose independent | rect. | 21 | 7 |
| 99 | 234.92 | temperature | 20 | 4320 | < th | dose dependent | sin | 13 | NA |
| 114 | 235.18 | temperature | 20 | 1440 | < th | dose independent | sin | 5 | NA |
| 118 | 235.23 | temperature | 20 | 4320 | < th | dose dependent | rect. | 19 | 15 |
| 131 | 235.34 | humidity | 70 | 43200 | < th | dose dependent | rect. | 22 | 2 |
| 142 | 235.41 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 20 |
| 145 | 235.44 | temperature | 20 | 1440 | > th | dose independent | sin | 5 | NA |
| 156 | 235.57 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 12 |
| 158 | 235.57 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 20 |
| 195 | 235.84 | temperature | 20 | 1440 | < th | dose independent | rect. | 17 | 20 |
| 212 | 236.00 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 12 |
| 213 | 236.01 | temperature | 20 | 1440 | > th | dose independent | rect. | 17 | 20 |
| 339 | 236.76 | radiation | 20 | 4320 | < th | dose independent | rect. | 2 | 5 |
| 343 | 236.77 | humidity | 60 | 43200 | < th | dose independent | rect. | 21 | 4 |
| 371 | 236.87 | humidity | 50 | 43200 | > th | dose independent | rect. | 20 | 9 |
| 414 | 237.08 | radiation | 20 | 4320 | < th | dose independent | rect. | 17 | 14 |
| 444 | 237.21 | humidity | 50 | 43200 | > th | dose dependent | rect. | 19 | 5 |
| 454 | 237.29 | radiation | 20 | 4320 | < th | dose independent | rect. | 23 | 8 |
| 455 | 237.29 | radiation | 20 | 4320 | < th | dose independent | rect. | 21 | 10 |
| 457 | 237.29 | humidity | 50 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 464 | 237.35 | humidity | 60 | 43200 | < th | dose independent | rect. | 21 | 2 |
| 492 | 237.51 | temperature | 20 | 4320 | < th | dose dependent | no | NA | NA |
| 494 | 237.54 | temperature | 20 | 4320 | < th | dose dependent | rect. | 5 | 23 |
| 512 | 237.67 | temperature | 20 | 1440 | < th | dose independent | rect. | 9 | 23 |
| 521 | 237.71 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 23 |
| 524 | 237.72 | temperature | 20 | 1440 | > th | dose independent | rect. | 9 | 23 |
| 534 | 237.81 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 536 | 237.82 | temperature | 20 | 4320 | < th | dose dependent | rect. | 1 | 23 |
| 539 | 237.83 | temperature | 20 | 4320 | < th | dose dependent | rect. | 3 | 23 |
| 544 | 237.86 | humidity | 50 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 555 | 237.91 | humidity | 80 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 571 | 238.05 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 573 | 238.06 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 602 | 238.23 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 6 |
| 635 | 238.47 | temperature | 20 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 639 | 238.48 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 23 |
| 659 | 238.55 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 23 |
| 675 | 238.65 | humidity | 80 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 689 | 238.72 | humidity | 50 | 43200 | < th | dose independent | rect. | 20 | 9 |
| 703 | 238.78 | humidity | 50 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 711 | 238.85 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 23 |
| 755 | 239.12 | humidity | 90 | 43200 | < th | dose dependent | rect. | 19 | 6 |
| 770 | 239.21 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 6 |
| 793 | 239.32 | humidity | 70 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 810 | 239.42 | humidity | 80 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 828 | 239.49 | temperature | 20 | 4320 | < th | dose independent | rect. | 12 | 12 |
| 847 | 239.57 | humidity | 80 | 43200 | < th | dose independent | rect. | 23 | 9 |
| 862 | 239.63 | humidity | 90 | 43200 | < th | dose dependent | rect. | 20 | 4 |
| 982 | 240.26 | humidity | 80 | 43200 | < th | dose independent | rect. | 23 | 13 |