Os09g0103200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0103200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26.41 | 0.241 | 10 | -1.06 | 0.52 | 0.372 | -0.0805 | 0.000964 | -0.102 | 16.1 | 0.17 | 97 | -- | -- |
| 26.35 | 0.239 | 10 | -1.07 | 0.515 | 0.365 | -0.0821 | -- | -0.107 | 16.2 | 0.1 | 110 | -- | -- |
| 26.39 | 0.239 | 10 | -1.07 | 0.521 | 0.374 | -- | 0.0375 | -0.108 | 16.1 | 0.02909 | 104 | -- | -- |
| 26.35 | 0.239 | 10 | -1.06 | 0.515 | 0.359 | -- | -- | -0.105 | 16.2 | 0.06 | 114 | -- | -- |
| 33.72 | 0.272 | 10 | -1.09 | -- | 0.198 | -- | 0.0117 | -0.127 | -- | 0.17 | 34 | -- | -- |
| 28.47 | 0.25 | 10.1 | -1.1 | 0.421 | -- | -0.0709 | -- | -0.13 | 19.6 | -- | -- | -- | -- |
| 28.48 | 0.25 | 10.1 | -1.1 | 0.421 | -- | -- | -- | -0.13 | 19.6 | -- | -- | -- | -- |
| 33.63 | 0.271 | 10 | -1.09 | -- | 0.197 | -- | -- | -0.123 | -- | 0.1105 | 6 | -- | -- |
| 56.79 | 0.351 | 10 | -- | 0.503 | 0.33 | -- | -- | -0.065 | 16.5 | 0.02 | 158 | -- | -- |
| 38.02 | 0.288 | 10 | -1.1 | -- | -- | -- | -- | -0.136 | -- | -- | -- | -- | -- |
| 60.11 | 0.363 | 10 | -- | 0.431 | -- | -- | -- | -0.00783 | 19.5 | -- | -- | -- | -- |
| 63.34 | 0.371 | 10 | -- | -- | 0.521 | -- | -- | -0.124 | -- | 0.003783 | 1493 | -- | -- |
| 70.02 | 0.391 | 10 | -- | -- | -- | -- | -- | -0.0139 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.32 | humidity | 90.0 | 90 | < th | dose independent | rect. | 9 | 5 |
| 2 | 24.35 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 15 | 18 |
| 3 | 24.38 | wind | 5.0 | 270 | < th | dose independent | rect. | 9 | 1 |
| 4 | 24.38 | humidity | 90.0 | 10 | < th | dose independent | rect. | 9 | 6 |
| 6 | 24.47 | temperature | 15.0 | 270 | > th | dose independent | rect. | 9 | 2 |
| 7 | 24.48 | wind | 5.0 | 270 | < th | dose independent | rect. | 8 | 3 |
| 9 | 24.53 | temperature | 15.0 | 90 | > th | dose independent | rect. | 9 | 5 |
| 10 | 24.56 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 11 | 24.57 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 3 | 2 |
| 16 | 24.61 | wind | 7.0 | 10 | < th | dose independent | rect. | 9 | 6 |
| 22 | 24.64 | wind | 9.0 | 270 | < th | dose dependent | rect. | 9 | 2 |
| 42 | 24.73 | humidity | 90.0 | 270 | < th | dose independent | rect. | 9 | 2 |
| 44 | 24.73 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 22 | 7 |
| 55 | 24.75 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 22 | 7 |
| 64 | 24.77 | wind | 7.0 | 90 | < th | dose independent | rect. | 9 | 5 |
| 66 | 24.77 | temperature | 20.0 | 10 | > th | dose independent | rect. | 9 | 6 |
| 104 | 24.83 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 1 | 11 |
| 113 | 24.84 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 1 | 11 |
| 116 | 24.84 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 22 | 14 |
| 118 | 24.84 | radiation | 20.0 | 10 | < th | dose dependent | sin | 12 | NA |
| 134 | 24.85 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 22 | 14 |
| 138 | 24.86 | atmosphere | 1005.0 | 43200 | < th | dose independent | sin | 8 | NA |
| 171 | 24.88 | radiation | 1.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 193 | 24.89 | atmosphere | 1005.0 | 43200 | > th | dose independent | sin | 8 | NA |
| 221 | 24.91 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 10 | 2 |
| 223 | 24.91 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 10 | 2 |
| 239 | 24.91 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 15 | 18 |
| 292 | 24.97 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 309 | 24.99 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 6 |
| 342 | 25.03 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 347 | 25.03 | radiation | 1.0 | 90 | > th | dose independent | rect. | 14 | 19 |
| 402 | 25.08 | temperature | 15.0 | 270 | > th | dose independent | rect. | 8 | 14 |
| 414 | 25.09 | temperature | 15.0 | 90 | > th | dose independent | rect. | 9 | 20 |
| 415 | 25.09 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 9 | 2 |
| 421 | 25.10 | radiation | 10.0 | 10 | > th | dose independent | rect. | 15 | 18 |
| 458 | 25.14 | atmosphere | 1010.0 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 477 | 25.16 | atmosphere | 1010.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 478 | 25.17 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 502 | 25.19 | temperature | 10.0 | 10 | > th | dose independent | rect. | 9 | 6 |
| 505 | 25.19 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 9 | 6 |
| 506 | 25.19 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 9 | 6 |
| 508 | 25.19 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 9 | 6 |
| 511 | 25.19 | temperature | 10.0 | 10 | > th | dose independent | rect. | 15 | 18 |
| 516 | 25.19 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 9 | 6 |
| 544 | 25.21 | atmosphere | 1010.0 | 43200 | < th | dose dependent | rect. | 7 | 4 |
| 555 | 25.22 | wind | 1.0 | 10 | > th | dose independent | rect. | 9 | 6 |
| 568 | 25.23 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 6 |
| 574 | 25.23 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 16 | 18 |
| 619 | 25.25 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 3 | 7 |
| 637 | 25.26 | wind | 9.0 | 30 | < th | dose independent | rect. | 15 | 18 |
| 687 | 25.28 | radiation | 1.0 | 10 | > th | dose independent | rect. | 9 | 6 |
| 690 | 25.28 | radiation | 40.0 | 30 | < th | dose independent | rect. | 15 | 18 |
| 723 | 25.29 | atmosphere | 1010.0 | 43200 | < th | dose dependent | sin | 4 | NA |
| 733 | 25.29 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 24 | 9 |
| 751 | 25.30 | humidity | 90.0 | 90 | < th | dose independent | rect. | 6 | 2 |
| 785 | 25.31 | atmosphere | 1010.0 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 843 | 25.34 | wind | 7.0 | 30 | < th | dose independent | rect. | 9 | 21 |
| 863 | 25.35 | atmosphere | 1005.0 | 43200 | < th | dose independent | no | NA | NA |
| 866 | 25.35 | humidity | 90.0 | 10 | < th | dose independent | rect. | 6 | 3 |
| 876 | 25.35 | humidity | 50.0 | 30 | > th | dose independent | rect. | 9 | 21 |
| 932 | 25.37 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 5 | 17 |
| 933 | 25.37 | radiation | 1.0 | 270 | > th | dose independent | rect. | 11 | 21 |
| 937 | 25.37 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 1 | 23 |
| 939 | 25.37 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 9 | 23 |
| 971 | 25.38 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 7 | 23 |
| 982 | 25.38 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 5 | 3 |