Os09g0101800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : WD40-like domain containing protein.
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Os09g0101800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : WD40-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 130.94 | 0.538 | 4.63 | 1.88 | 1.64 | 2.75 | 0.634 | 5.77 | 0.811 | 19.7 | 6.459 | 446 | -- | -- |
| 141.56 | 0.554 | 4.69 | 2.04 | 1.54 | 1.4 | 0.217 | -- | 0.781 | 19.7 | 7.2 | 323 | -- | -- |
| 131.7 | 0.534 | 4.62 | 1.87 | 1.66 | 2.67 | -- | 5.09 | 0.825 | 19.8 | 6.4 | 455 | -- | -- |
| 135.9 | 0.543 | 4.71 | 1.96 | 1.62 | 1.48 | -- | -- | 0.735 | 19.7 | 5.863 | 471 | -- | -- |
| 252.03 | 0.743 | 4.63 | 2.12 | -- | 0.775 | -- | 1.19 | 0.778 | -- | 6.5 | 1427 | -- | -- |
| 153.64 | 0.581 | 4.67 | 2.25 | 1.39 | -- | 0.77 | -- | 0.826 | 19.8 | -- | -- | -- | -- |
| 155.33 | 0.584 | 4.67 | 2.23 | 1.39 | -- | -- | -- | 0.826 | 19.9 | -- | -- | -- | -- |
| 247.46 | 0.733 | 4.62 | 1.95 | -- | 0.837 | -- | -- | 0.769 | -- | 6.297 | 4225 | -- | -- |
| 227.81 | 0.703 | 4.7 | -- | 1.86 | 2.18 | -- | -- | 0.727 | 19.8 | 5.695 | 483 | -- | -- |
| 259.61 | 0.753 | 4.63 | 2.22 | -- | -- | -- | -- | 0.807 | -- | -- | -- | -- | -- |
| 286.82 | 0.792 | 4.72 | -- | 1.37 | -- | -- | -- | 0.578 | 20 | -- | -- | -- | -- |
| 316.68 | 0.829 | 4.7 | -- | -- | 1.73 | -- | -- | 0.597 | -- | 5.8 | 7197 | -- | -- |
| 389.37 | 0.921 | 4.69 | -- | -- | -- | -- | -- | 0.561 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 125.96 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 20 | 3 |
| 3 | 126.13 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 20 | 3 |
| 4 | 126.42 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 7 | 127.26 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 12 | 127.97 | wind | 5.0 | 720 | < th | dose independent | rect. | 21 | 16 |
| 16 | 128.11 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 19 | 128.52 | wind | 5.0 | 720 | < th | dose independent | rect. | 21 | 14 |
| 39 | 129.50 | wind | 5.0 | 720 | > th | dose independent | rect. | 20 | 17 |
| 55 | 130.01 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 69 | 130.46 | wind | 5.0 | 720 | < th | dose independent | rect. | 21 | 21 |
| 71 | 130.55 | wind | 5.0 | 720 | > th | dose independent | sin | 5 | NA |
| 76 | 130.68 | wind | 5.0 | 720 | < th | dose independent | sin | 6 | NA |
| 78 | 130.72 | wind | 5.0 | 720 | > th | dose independent | rect. | 7 | 6 |
| 81 | 130.74 | wind | 5.0 | 720 | > th | dose dependent | rect. | 20 | 17 |
| 83 | 130.84 | wind | 5.0 | 720 | > th | dose independent | rect. | 5 | 8 |
| 104 | 131.05 | wind | 5.0 | 720 | > th | dose dependent | sin | 6 | NA |
| 111 | 131.12 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 116 | 131.23 | wind | 5.0 | 1440 | < th | dose independent | rect. | 7 | 5 |
| 144 | 131.55 | wind | 5.0 | 720 | > th | dose independent | rect. | 1 | 12 |
| 153 | 131.64 | wind | 7.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 157 | 131.67 | wind | 5.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 165 | 131.72 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 10 | 3 |
| 183 | 131.87 | wind | 5.0 | 720 | > th | dose dependent | rect. | 17 | 19 |
| 205 | 132.04 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 8 | 5 |
| 243 | 132.42 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 249 | 132.47 | wind | 7.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 250 | 132.47 | wind | 5.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 251 | 132.48 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 252 | 132.48 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 254 | 132.51 | wind | 5.0 | 720 | > th | dose dependent | rect. | 4 | 9 |
| 259 | 132.53 | wind | 5.0 | 720 | > th | dose dependent | rect. | 7 | 6 |
| 275 | 132.61 | temperature | 20.0 | 4320 | > th | dose independent | sin | 18 | NA |
| 285 | 132.68 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 5 |
| 331 | 132.91 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 371 | 133.06 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 389 | 133.15 | wind | 5.0 | 1440 | < th | dose independent | rect. | 2 | 11 |
| 423 | 133.29 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 434 | 133.30 | wind | 1.0 | 43200 | > th | dose independent | rect. | 2 | 5 |
| 475 | 133.46 | temperature | 20.0 | 4320 | < th | dose independent | sin | 18 | NA |
| 499 | 133.55 | wind | 5.0 | 720 | < th | dose independent | rect. | 5 | 14 |
| 512 | 133.61 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 8 |
| 516 | 133.64 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 22 | 4 |
| 540 | 133.73 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 566 | 133.77 | wind | 5.0 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 586 | 133.84 | wind | 5.0 | 720 | < th | dose independent | rect. | 16 | 21 |
| 587 | 133.84 | wind | 5.0 | 720 | > th | dose dependent | rect. | 11 | 1 |
| 601 | 133.89 | wind | 7.0 | 4320 | > th | dose independent | rect. | 20 | 8 |
| 632 | 133.98 | wind | 5.0 | 720 | < th | dose independent | rect. | 3 | 15 |
| 640 | 134.01 | wind | 7.0 | 14400 | > th | dose independent | rect. | 6 | 3 |
| 644 | 134.01 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 654 | 134.05 | wind | 7.0 | 4320 | < th | dose independent | rect. | 20 | 8 |
| 668 | 134.07 | wind | 5.0 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 689 | 134.16 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 15 |
| 697 | 134.18 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 2 |
| 705 | 134.21 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 20 | 8 |
| 731 | 134.29 | wind | 5.0 | 14400 | > th | dose independent | rect. | 21 | 20 |
| 743 | 134.32 | wind | 9.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 748 | 134.34 | wind | 5.0 | 14400 | > th | dose independent | rect. | 23 | 18 |
| 778 | 134.42 | wind | 5.0 | 14400 | < th | dose independent | rect. | 23 | 18 |
| 795 | 134.44 | wind | 5.0 | 30 | > th | dose dependent | rect. | 17 | 23 |
| 799 | 134.45 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 4 |
| 800 | 134.45 | wind | 5.0 | 270 | > th | dose dependent | rect. | 22 | 23 |
| 808 | 134.47 | wind | 5.0 | 720 | < th | dose independent | rect. | 1 | 17 |
| 830 | 134.50 | wind | 5.0 | 14400 | < th | dose independent | rect. | 21 | 20 |
| 840 | 134.53 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 2 |
| 894 | 134.61 | wind | 5.0 | 270 | > th | dose dependent | no | NA | NA |
| 895 | 134.61 | wind | 5.0 | 270 | > th | dose dependent | rect. | 2 | 23 |
| 896 | 134.61 | wind | 5.0 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 898 | 134.62 | wind | 5.0 | 720 | < th | dose independent | rect. | 5 | 23 |
| 900 | 134.63 | wind | 7.0 | 270 | < th | dose independent | no | NA | NA |
| 906 | 134.63 | wind | 5.0 | 270 | > th | dose dependent | rect. | 24 | 23 |
| 912 | 134.64 | wind | 5.0 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 934 | 134.71 | wind | 1.0 | 43200 | < th | dose independent | rect. | 2 | 5 |
| 970 | 134.77 | wind | 5.0 | 720 | > th | dose independent | rect. | 4 | 22 |
| 995 | 134.81 | wind | 7.0 | 14400 | > th | dose independent | rect. | 14 | 1 |