Os08g0566100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF239, plant domain containing protein.
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Os08g0566100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF239, plant domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 407.75 | 0.949 | 4.65 | -0.547 | 0.689 | -1.27 | 1.34 | 1.09 | 0.236 | 8.7 | 14.92 | 89 | 9.09 | 17.9 |
| 411.22 | 0.944 | 4.66 | -0.459 | 0.684 | -1.28 | 1.12 | -- | 0.268 | 8.75 | 15.09 | 88 | 9.17 | 17.9 |
| 411.79 | 0.945 | 4.65 | -0.455 | 0.738 | -1.22 | -- | 0.524 | 0.252 | 8.19 | 14.9 | 83 | 9.15 | 17.9 |
| 412.05 | 0.945 | 4.65 | -0.447 | 0.71 | -1.23 | -- | -- | 0.251 | 8.09 | 15.06 | 72 | 9.38 | 17.8 |
| 425.05 | 0.96 | 4.67 | -0.355 | -- | -1.61 | -- | 0.128 | 0.276 | -- | 15.19 | 64 | 9.65 | 17.7 |
| 457.75 | 1 | 4.61 | -0.498 | 1.82 | -- | 0.187 | -- | 0.298 | 7.05 | -- | -- | -- | -- |
| 457.84 | 1 | 4.61 | -0.494 | 1.82 | -- | -- | -- | 0.298 | 7.03 | -- | -- | -- | -- |
| 424.91 | 0.96 | 4.67 | -0.441 | -- | -1.62 | -- | -- | 0.259 | -- | 15.19 | 58 | 9.65 | 17.7 |
| 417.48 | 0.952 | 4.65 | -- | 0.656 | -1.26 | -- | -- | 0.275 | 8.22 | 15.1 | 71 | 9.42 | 17.8 |
| 632.68 | 1.18 | 4.65 | -0.458 | -- | -- | -- | -- | 0.331 | -- | -- | -- | -- | -- |
| 464.28 | 1.01 | 4.6 | -- | 1.82 | -- | -- | -- | 0.353 | 7.05 | -- | -- | -- | -- |
| 429.93 | 0.966 | 4.66 | -- | -- | -1.62 | -- | -- | 0.314 | -- | 15.28 | 53 | 9.69 | 17.7 |
| 638.21 | 1.18 | 4.64 | -- | -- | -- | -- | -- | 0.382 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 398.95 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 2 | 398.95 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 3 | 399.05 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 4 | 399.05 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 5 | 400.10 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 9 | 4 |
| 8 | 400.12 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 9 | 4 |
| 13 | 400.74 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 9 | 5 |
| 18 | 401.08 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 10 | 3 |
| 25 | 401.70 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 8 | 7 |
| 66 | 405.25 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 78 | 405.90 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 13 | 6 |
| 84 | 406.29 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 90 | 406.67 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 12 | 7 |
| 98 | 406.93 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 9 | 10 |
| 133 | 407.66 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 134 | 407.66 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 139 | 407.72 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 140 | 407.73 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 151 | 407.83 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 6 | 4 |
| 173 | 408.03 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 6 | 2 |
| 213 | 408.39 | temperature | 15.0 | 90 | > th | dose independent | rect. | 9 | 18 |
| 227 | 408.45 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 18 | 10 |
| 236 | 408.48 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 22 | 17 |
| 248 | 408.52 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 18 | 20 |
| 280 | 408.57 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 6 | 22 |
| 288 | 408.59 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 16 | 3 |
| 302 | 408.60 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 22 | 22 |
| 321 | 408.64 | temperature | 20.0 | 43200 | < th | dose dependent | sin | 4 | NA |
| 369 | 408.68 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 5 | 8 |
| 388 | 408.70 | temperature | 20.0 | 43200 | < th | dose dependent | no | NA | NA |
| 395 | 408.70 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 10 | 23 |
| 451 | 408.75 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 11 | 17 |
| 585 | 409.00 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 12 | 2 |
| 627 | 409.19 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 630 | 409.20 | temperature | 20.0 | 43200 | < th | dose independent | sin | 23 | NA |
| 675 | 409.36 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 12 | 2 |
| 684 | 409.38 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 715 | 409.49 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 733 | 409.55 | temperature | 15.0 | 270 | > th | dose independent | rect. | 9 | 16 |
| 782 | 409.73 | temperature | 20.0 | 43200 | > th | dose independent | sin | 23 | NA |
| 789 | 409.75 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 19 |
| 790 | 409.76 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 23 | 17 |
| 829 | 409.91 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 973 | 410.35 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 978 | 410.36 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |