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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os08g0565900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Lipolytic enzyme, G-D-S-L family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3 (0.0274) R2 : 0.000115
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0132 (0.0576) R2dN8 : 0.000149 R2N8 : 0.000115
σ : 0.515
deviance : 121.86
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
116.31 0.507 3.03 -0.306 0.157 0.37 -0.0349 -3.82 -0.041 11.5 30 10 -- --
119.34 0.513 3 0.000262 0.175 0.0753 -0.117 -- -0.00994 11.4 30 10 -- --
116.21 0.506 3.03 -0.258 0.156 0.244 -- -2.9 -0.0495 11.5 30 9 -- --
119.32 0.509 3 -0.0093 0.17 0.0838 -- -- -0.0126 11.1 29.6 10 -- --
117.64 0.508 3.03 -0.281 -- 0.298 -- -3.07 -0.0527 -- 30 9 -- --
119.54 0.513 3 0.00816 0.189 -- -0.123 -- -0.0106 11.8 -- -- -- --
119.6 0.512 3 0.003 0.189 -- -- -- -0.0113 11.6 -- -- -- --
120.96 0.512 3 -0.0232 -- 0.134 -- -- -0.014 -- 29.51 10 -- --
119.32 0.509 3 -- 0.169 0.0834 -- -- -0.0113 11.1 29.58 10 -- --
121.86 0.516 3 -0.0023 -- -- -- -- -0.0135 -- -- -- -- --
119.6 0.512 3 -- 0.189 -- -- -- -0.0116 11.6 -- -- -- --
120.87 0.512 3.01 -- -- 0.116 -- -- -0.0172 -- 28.67 10 -- --
121.86 0.515 3 -- -- -- -- -- -0.0132 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 112.08 precipitation 0.1 1440 > th dose independent rect. 10 3
2 112.08 precipitation 0.1 1440 > th dose dependent rect. 10 3
3 112.12 precipitation 0.1 1440 > th dose independent rect. 12 1
5 112.12 precipitation 0.1 1440 > th dose dependent rect. 12 1
7 112.34 temperature 25.0 90 > th dose independent rect. 11 2
8 112.43 radiation 10.0 90 < th dose dependent rect. 11 1
9 112.44 wind 1.0 1440 < th dose independent rect. 17 1
10 112.54 wind 1.0 1440 > th dose independent rect. 17 1
11 112.59 wind 1.0 1440 < th dose dependent rect. 17 1
13 113.05 radiation 10.0 90 < th dose independent rect. 11 1
15 113.16 wind 7.0 30 < th dose dependent rect. 12 1
18 113.24 wind 5.0 30 < th dose independent rect. 12 1
19 113.29 humidity 80.0 30 < th dose independent rect. 12 1
22 113.33 radiation 20.0 30 > th dose independent rect. 12 1
25 113.40 atmosphere 1010.0 30 < th dose independent rect. 12 1
26 113.40 temperature 15.0 10 > th dose dependent rect. 12 1
30 113.44 humidity 60.0 30 > th dose independent rect. 12 1
32 113.46 wind 1.0 30 > th dose independent rect. 12 1
37 113.52 wind 9.0 30 < th dose independent rect. 12 1
38 113.52 temperature 10.0 30 > th dose independent rect. 12 1
40 113.52 atmosphere 995.0 30 > th dose independent rect. 12 1
43 113.52 precipitation 0.1 30 < th dose independent rect. 12 1
44 113.52 temperature 10.0 30 > th dose independent rect. 13 23
45 113.52 precipitation 0.1 30 < th dose dependent rect. 12 1
49 113.55 atmosphere 1015.0 30 < th dose dependent rect. 12 1
57 113.70 atmosphere 995.0 30 > th dose dependent rect. 12 1
61 113.78 humidity 90.0 30 < th dose dependent rect. 12 1
63 113.80 temperature 30.0 30 < th dose independent rect. 12 1
64 113.83 humidity 50.0 30 > th dose dependent rect. 12 1
78 113.97 radiation 40.0 30 < th dose independent rect. 12 1
80 114.01 humidity 80.0 4320 > th dose dependent rect. 4 2
88 114.10 temperature 10.0 1440 > th dose independent rect. 13 1
92 114.10 atmosphere 995.0 1440 > th dose independent rect. 13 1
95 114.10 temperature 10.0 1440 > th dose independent rect. 14 23
107 114.19 radiation 1.0 30 > th dose dependent rect. 12 1
109 114.22 atmosphere 1000.0 10 < th dose independent rect. 2 2
111 114.23 atmosphere 1000.0 10 < th dose dependent rect. 2 2
113 114.24 wind 1.0 30 > th dose dependent rect. 12 1
115 114.25 atmosphere 1000.0 90 < th dose independent rect. 2 1
119 114.25 atmosphere 1000.0 90 < th dose dependent rect. 2 1
153 114.43 humidity 90.0 4320 > th dose independent rect. 4 2
249 114.95 humidity 90.0 4320 < th dose dependent rect. 23 8
298 115.11 temperature 30.0 10 < th dose independent rect. 13 23
349 115.26 humidity 90.0 4320 < th dose independent rect. 5 1
351 115.26 humidity 90.0 4320 < th dose dependent rect. 23 3
369 115.35 atmosphere 1000.0 10 > th dose independent rect. 13 23
379 115.38 humidity 90.0 4320 < th dose dependent rect. 4 3
458 115.50 humidity 90.0 4320 < th dose independent rect. 2 4
480 115.54 humidity 80.0 4320 < th dose independent rect. 23 8
532 115.58 humidity 90.0 4320 < th dose independent rect. 2 6
562 115.62 humidity 80.0 4320 > th dose independent rect. 23 8
568 115.63 wind 1.0 10 < th dose dependent rect. 9 9
580 115.64 wind 1.0 10 < th dose dependent rect. 9 7
595 115.66 humidity 80.0 4320 > th dose dependent sin 8 NA
597 115.66 wind 1.0 10 < th dose dependent rect. 9 5
605 115.67 temperature 30.0 10 > th dose independent sin 4 NA
634 115.72 temperature 20.0 90 < th dose independent rect. 8 1
666 115.76 wind 1.0 10 < th dose dependent rect. 12 4
676 115.77 wind 1.0 10 < th dose independent rect. 12 6
680 115.77 wind 1.0 90 < th dose dependent rect. 12 1
681 115.77 wind 1.0 10 < th dose dependent rect. 12 2
691 115.78 wind 1.0 10 < th dose independent rect. 12 4
702 115.79 precipitation 0.1 10 < th dose independent rect. 13 23
707 115.79 precipitation 0.1 10 < th dose dependent rect. 13 23
709 115.80 wind 1.0 10 < th dose independent rect. 12 2
712 115.80 atmosphere 1000.0 90 > th dose independent rect. 13 22
713 115.80 wind 9.0 30 < th dose independent rect. 13 23
717 115.81 wind 1.0 90 < th dose independent rect. 12 1
718 115.81 wind 1.0 10 < th dose independent rect. 9 7
758 115.84 wind 1.0 90 < th dose dependent rect. 3 1
764 115.85 wind 1.0 10 < th dose independent rect. 14 4
771 115.85 wind 1.0 90 < th dose dependent rect. 12 3
773 115.85 wind 1.0 10 < th dose dependent rect. 14 4
780 115.86 wind 1.0 10 < th dose independent rect. 14 2
786 115.86 wind 1.0 10 < th dose dependent rect. 14 2
904 115.94 humidity 80.0 270 < th dose dependent rect. 6 1
909 115.95 temperature 30.0 10 < th dose independent sin 1 NA
960 116.00 wind 1.0 90 < th dose independent rect. 2 2
984 116.03 wind 1.0 720 > th dose independent rect. 1 11