Os08g0562500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transferase family protein.
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Os08g0562500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Transferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 81.97 | 0.425 | 2.98 | 1.36 | 0.174 | -17.3 | 0.209 | 111 | -0.0151 | 8.64 | 994.7 | 807 | -- | -- |
| 320.12 | 0.833 | 3.13 | 0.305 | 0.44 | -13.5 | 1.15 | -- | 0.205 | 9.18 | 994.6 | 31 | -- | -- |
| 82.05 | 0.422 | 2.98 | 1.36 | 0.174 | -17.5 | -- | 112 | -0.0158 | 8.6 | 994.5 | 824 | -- | -- |
| 85.5 | 0.431 | 3.23 | -0.0588 | 0.184 | 1.56 | -- | -- | -0.036 | 7.96 | 994.7 | 246 | -- | -- |
| 83.73 | 0.426 | 2.98 | 1.37 | -- | -17.6 | -- | 112 | -0.0152 | -- | 994.6 | 816 | -- | -- |
| 90.18 | 0.445 | 3.23 | -0.0578 | 0.157 | -- | 0.164 | -- | -0.0302 | 7.84 | -- | -- | -- | -- |
| 90.26 | 0.445 | 3.23 | -0.0534 | 0.157 | -- | -- | -- | -0.0303 | 7.88 | -- | -- | -- | -- |
| 85.96 | 0.432 | 3.23 | -0.0879 | -- | 1.36 | -- | -- | -0.013 | -- | 996.7 | 213 | -- | -- |
| 84.42 | 0.428 | 3.22 | -- | 0.178 | 1.43 | -- | -- | -0.0128 | 8.16 | 996.6 | 201 | -- | -- |
| 91.61 | 0.447 | 3.23 | -0.0516 | -- | -- | -- | -- | -0.0282 | -- | -- | -- | -- | -- |
| 90.34 | 0.445 | 3.22 | -- | 0.157 | -- | -- | -- | -0.0244 | 7.91 | -- | -- | -- | -- |
| 86.16 | 0.432 | 3.22 | -- | -- | 1.35 | -- | -- | -0.00404 | -- | 996.6 | 213 | -- | -- |
| 91.68 | 0.447 | 3.23 | -- | -- | -- | -- | -- | -0.0225 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 79.67 | temperature | 25 | 90 | > th | dose dependent | rect. | 2 | 2 |
| 2 | 79.69 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 2 | 2 |
| 4 | 79.69 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 2 | 2 |
| 6 | 79.70 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 2 | 1 |
| 9 | 79.70 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 36 | 80.43 | temperature | 25 | 30 | > th | dose independent | rect. | 2 | 2 |
| 51 | 81.90 | atmosphere | 995 | 720 | < th | dose independent | rect. | 16 | 1 |
| 54 | 81.90 | atmosphere | 995 | 720 | < th | dose dependent | rect. | 16 | 1 |
| 123 | 82.42 | atmosphere | 995 | 720 | < th | dose dependent | sin | 9 | NA |
| 148 | 82.81 | atmosphere | 995 | 720 | < th | dose independent | sin | 9 | NA |
| 149 | 82.86 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 17 | 11 |
| 154 | 83.00 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 17 | 12 |
| 160 | 83.11 | atmosphere | 995 | 720 | > th | dose independent | sin | 9 | NA |
| 242 | 83.98 | atmosphere | 995 | 720 | < th | dose dependent | no | NA | NA |
| 434 | 84.00 | atmosphere | 995 | 720 | > th | dose independent | rect. | 16 | 9 |
| 459 | 84.08 | temperature | 25 | 270 | > th | dose dependent | rect. | 24 | 4 |
| 470 | 84.16 | atmosphere | 1000 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 473 | 84.18 | temperature | 20 | 90 | < th | dose independent | rect. | 18 | 3 |
| 475 | 84.20 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 24 | 1 |
| 482 | 84.24 | temperature | 20 | 90 | < th | dose dependent | rect. | 18 | 3 |
| 486 | 84.28 | atmosphere | 995 | 720 | > th | dose independent | rect. | 16 | 17 |
| 500 | 84.38 | temperature | 20 | 10 | < th | dose independent | rect. | 19 | 1 |
| 508 | 84.38 | temperature | 20 | 10 | < th | dose dependent | rect. | 19 | 1 |
| 525 | 84.42 | atmosphere | 995 | 720 | < th | dose independent | no | NA | NA |
| 774 | 84.61 | humidity | 90 | 90 | > th | dose independent | rect. | 18 | 1 |
| 779 | 84.62 | humidity | 90 | 90 | > th | dose dependent | rect. | 18 | 1 |
| 808 | 84.80 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 17 | 3 |
| 812 | 84.84 | atmosphere | 995 | 720 | > th | dose independent | sin | 14 | NA |
| 815 | 84.87 | atmosphere | 995 | 720 | > th | dose independent | no | NA | NA |
| 819 | 84.89 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 17 | 3 |
| 882 | 85.17 | atmosphere | 995 | 720 | > th | dose independent | sin | 22 | NA |
| 884 | 85.17 | temperature | 30 | 720 | > th | dose dependent | rect. | 16 | 18 |
| 885 | 85.18 | atmosphere | 995 | 720 | > th | dose independent | rect. | 21 | 23 |
| 904 | 85.26 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 17 | 4 |
| 908 | 85.28 | atmosphere | 995 | 720 | > th | dose independent | rect. | 3 | 23 |
| 913 | 85.31 | atmosphere | 995 | 720 | > th | dose independent | rect. | 13 | 6 |
| 917 | 85.32 | atmosphere | 995 | 720 | > th | dose independent | rect. | 4 | 15 |
| 919 | 85.32 | atmosphere | 995 | 720 | > th | dose independent | rect. | 7 | 18 |
| 920 | 85.32 | temperature | 30 | 720 | > th | dose dependent | rect. | 16 | 1 |
| 925 | 85.34 | atmosphere | 995 | 720 | > th | dose independent | rect. | 13 | 22 |
| 926 | 85.34 | atmosphere | 1000 | 90 | < th | dose dependent | sin | 13 | NA |
| 929 | 85.36 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 18 | 2 |
| 931 | 85.38 | atmosphere | 1000 | 10 | < th | dose dependent | sin | 12 | NA |
| 964 | 85.44 | atmosphere | 995 | 720 | > th | dose independent | rect. | 14 | 15 |
| 997 | 85.46 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 17 | 2 |