Os08g0558900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to F1F0-ATPase inhibitor protein.
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Os08g0558900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to F1F0-ATPase inhibitor protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 35.45 | 0.28 | 14.2 | -0.77 | 0.666 | -0.4 | -0.872 | 0.616 | -0.0466 | 19.4 | 1008 | 19998 | -- | -- |
| 35.89 | 0.279 | 14.2 | -0.553 | 0.666 | -0.359 | -0.816 | -- | -0.0404 | 19.4 | 1007 | 12429 | -- | -- |
| 37.48 | 0.285 | 14.2 | -0.753 | 0.672 | -0.402 | -- | 0.618 | -0.0516 | 19.4 | 1008 | 20699 | -- | -- |
| 35.68 | 0.278 | 14.1 | -0.514 | 0.677 | -0.63 | -- | -- | 0.0525 | 19.3 | 999.8 | 13062 | -- | -- |
| 60.34 | 0.362 | 14.2 | -0.832 | -- | -0.499 | -- | 0.806 | -0.0602 | -- | 1002 | 20763 | -- | -- |
| 41.18 | 0.301 | 14.1 | -0.433 | 0.666 | -- | -0.85 | -- | 0.063 | 19.4 | -- | -- | -- | -- |
| 43.15 | 0.308 | 14.1 | -0.415 | 0.664 | -- | -- | -- | 0.0612 | 19.5 | -- | -- | -- | -- |
| 58.78 | 0.357 | 14.1 | -0.582 | -- | -0.65 | -- | -- | 0.0126 | -- | 994.6 | 14983 | -- | -- |
| 43.02 | 0.305 | 14.1 | -- | 0.665 | -0.498 | -- | -- | 0.106 | 19.4 | 998.2 | 16712 | -- | -- |
| 66.69 | 0.382 | 14.1 | -0.425 | -- | -- | -- | -- | 0.0506 | -- | -- | -- | -- | -- |
| 47.68 | 0.323 | 14.1 | -- | 0.668 | -- | -- | -- | 0.107 | 19.4 | -- | -- | -- | -- |
| 66.63 | 0.38 | 14.1 | -- | -- | -0.521 | -- | -- | 0.0957 | -- | 992.6 | 16576 | -- | -- |
| 71.45 | 0.395 | 14.1 | -- | -- | -- | -- | -- | 0.0978 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.63 | atmosphere | 995 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 2 | 32.63 | atmosphere | 1010 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 13 | 32.68 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 163 | 32.86 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 14 | 3 |
| 164 | 32.86 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 9 | 9 |
| 176 | 32.87 | atmosphere | 995 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 193 | 32.88 | atmosphere | 995 | 14400 | > th | dose dependent | sin | 16 | NA |
| 212 | 32.89 | atmosphere | 1015 | 14400 | < th | dose dependent | sin | 16 | NA |
| 214 | 32.89 | atmosphere | 1015 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 224 | 32.90 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 8 | 10 |
| 264 | 32.92 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 2 |
| 284 | 32.93 | atmosphere | 1005 | 14400 | > th | dose independent | sin | 19 | NA |
| 290 | 32.93 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 12 | 11 |
| 315 | 32.94 | atmosphere | 1005 | 14400 | < th | dose independent | sin | 20 | NA |
| 321 | 32.94 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 12 | 10 |
| 367 | 32.96 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 14 | 8 |
| 511 | 33.01 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 16 | 6 |
| 793 | 33.09 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 12 | 5 |
| 981 | 33.13 | atmosphere | 995 | 14400 | > th | dose dependent | no | NA | NA |