Os08g0558700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0558700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 17.62 | 0.197 | 11.4 | -0.436 | 0.495 | -0.462 | -0.25 | -0.488 | -0.0155 | 5.16 | 0.5279 | 5690 | -- | -- |
| 17.66 | 0.196 | 11.4 | -0.421 | 0.492 | -0.434 | -0.222 | -- | -0.0175 | 5.16 | 1.007 | 5690 | -- | -- |
| 17.72 | 0.196 | 11.4 | -0.43 | 0.487 | -0.419 | -- | -0.351 | -0.0161 | 5.2 | 0.8783 | 5690 | -- | -- |
| 17.8 | 0.197 | 11.4 | -0.421 | 0.495 | -0.431 | -- | -- | -0.0113 | 5.21 | 0.9999 | 5698 | -- | -- |
| 30.34 | 0.257 | 11.4 | -0.43 | -- | -0.387 | -- | -0.476 | -0.0051 | -- | 0.9898 | 5525 | -- | -- |
| 21.51 | 0.217 | 11.4 | -0.332 | 0.494 | -- | -0.161 | -- | -0.0657 | 5.22 | -- | -- | -- | -- |
| 21.58 | 0.218 | 11.4 | -0.332 | 0.493 | -- | -- | -- | -0.0649 | 5.24 | -- | -- | -- | -- |
| 30.51 | 0.257 | 11.4 | -0.413 | -- | -0.445 | -- | -- | -0.00254 | -- | 1 | 5337 | -- | -- |
| 21.19 | 0.214 | 11.4 | -- | 0.465 | -0.307 | -- | -- | 0.0328 | 5.26 | 0.4925 | 15714 | -- | -- |
| 34.28 | 0.274 | 11.4 | -0.315 | -- | -- | -- | -- | -0.0526 | -- | -- | -- | -- | -- |
| 24.48 | 0.231 | 11.4 | -- | 0.487 | -- | -- | -- | -0.028 | 5.26 | -- | -- | -- | -- |
| 33.67 | 0.27 | 11.4 | -- | -- | -0.33 | -- | -- | 0.0629 | -- | 0.1387 | 15406 | -- | -- |
| 36.89 | 0.283 | 11.4 | -- | -- | -- | -- | -- | -0.0177 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 16.73 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 13 |
| 2 | 16.73 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 13 |
| 3 | 16.73 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 13 |
| 7 | 16.90 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 13 |
| 10 | 16.96 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 14 | 3 |
| 13 | 16.99 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 8 | 9 |
| 14 | 17.00 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 5 | 5 |
| 16 | 17.02 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 5 | 5 |
| 20 | 17.04 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 8 | 9 |
| 22 | 17.04 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 8 | 9 |
| 29 | 17.06 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 33 | 17.09 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 2 | NA |
| 34 | 17.09 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 5 | 5 |
| 36 | 17.09 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 5 | 5 |
| 38 | 17.10 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 2 | NA |
| 39 | 17.10 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 14 | 3 |
| 41 | 17.10 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 2 | NA |
| 43 | 17.10 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 8 | 9 |
| 45 | 17.11 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 14 | 3 |
| 46 | 17.11 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 14 | 3 |
| 52 | 17.14 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 53 | 17.14 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 5 | 2 |
| 55 | 17.14 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 5 | 2 |
| 57 | 17.15 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 60 | 17.15 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 16 | 1 |
| 66 | 17.17 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 70 | 17.17 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 7 |
| 73 | 17.18 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 80 | 17.19 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 10 |
| 82 | 17.20 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 84 | 17.21 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 10 |
| 87 | 17.21 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 10 |
| 104 | 17.26 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 5 | 2 |
| 106 | 17.26 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 16 |
| 109 | 17.26 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 16 |
| 114 | 17.27 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 16 |
| 118 | 17.29 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 5 | 2 |
| 144 | 17.34 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 159 | 17.36 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 2 |
| 165 | 17.37 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 7 |
| 177 | 17.39 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 6 |
| 194 | 17.41 | wind | 3.0 | 43200 | > th | dose independent | rect. | 21 | 11 |
| 195 | 17.42 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 198 | 17.43 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 204 | 17.43 | wind | 3.0 | 43200 | < th | dose independent | rect. | 21 | 11 |
| 239 | 17.46 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 248 | 17.47 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 251 | 17.47 | wind | 3.0 | 43200 | < th | dose independent | rect. | 4 | 3 |
| 258 | 17.47 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 7 | 4 |
| 268 | 17.48 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 7 | 7 |
| 281 | 17.49 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 297 | 17.50 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 299 | 17.51 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 305 | 17.51 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 8 | 12 |
| 313 | 17.51 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 3 | NA |
| 316 | 17.51 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 8 | 12 |
| 334 | 17.52 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 369 | 17.55 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 388 | 17.55 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 17 | 15 |
| 408 | 17.57 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 7 |
| 415 | 17.57 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 416 | 17.57 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 7 |
| 417 | 17.58 | wind | 3.0 | 43200 | > th | dose independent | sin | 8 | NA |
| 420 | 17.58 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 3 |
| 424 | 17.58 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 7 |
| 433 | 17.59 | wind | 1.0 | 4320 | > th | dose independent | rect. | 17 | 4 |
| 464 | 17.60 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 21 | 10 |
| 469 | 17.61 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 477 | 17.61 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 4 | 12 |
| 487 | 17.61 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 15 | 2 |
| 520 | 17.62 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 9 | 4 |
| 529 | 17.63 | wind | 3.0 | 43200 | < th | dose independent | sin | 8 | NA |
| 530 | 17.63 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 531 | 17.63 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 534 | 17.63 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 18 | 3 |
| 586 | 17.65 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 637 | 17.66 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 10 | 2 |
| 647 | 17.67 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 722 | 17.70 | temperature | 25.0 | 14400 | > th | dose independent | sin | 1 | NA |
| 753 | 17.70 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 7 | 6 |
| 806 | 17.72 | temperature | 25.0 | 14400 | < th | dose independent | sin | 1 | NA |
| 852 | 17.73 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 8 | 4 |
| 898 | 17.73 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 9 | 10 |
| 905 | 17.73 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 15 |
| 906 | 17.73 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 16 |
| 934 | 17.74 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 935 | 17.74 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 950 | 17.74 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 23 | 13 |
| 953 | 17.74 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 23 |
| 980 | 17.75 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 4 |