Os08g0558200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glutathione S-transferase, N-terminal domain containing protein.
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Os08g0558200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glutathione S-transferase, N-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 151.17 | 0.578 | 10.8 | -0.5 | 2.63 | -1.41 | 3.53 | 8.66 | -0.401 | 9.28 | 26.19 | 811 | -- | -- |
| 162.42 | 0.594 | 10.9 | -1.88 | 2.84 | -0.624 | 2.9 | -- | -0.675 | 9.37 | 25.5 | 472 | -- | -- |
| 188.81 | 0.64 | 10.8 | -0.156 | 2.81 | -1.3 | -- | 8.74 | -0.483 | 9.23 | 27.7 | 2249 | -- | -- |
| 188.7 | 0.64 | 10.9 | -1.7 | 2.68 | -0.744 | -- | -- | -0.625 | 9.42 | 25.1 | 533 | -- | -- |
| 607.5 | 1.15 | 10.8 | 0.325 | -- | -1.97 | -- | 8.07 | -0.128 | -- | 25.15 | 2149 | -- | -- |
| 172.59 | 0.616 | 10.9 | -1.98 | 2.92 | -- | 3.03 | -- | -0.708 | 9.18 | -- | -- | -- | -- |
| 205.09 | 0.671 | 10.9 | -1.87 | 2.9 | -- | -- | -- | -0.705 | 9.2 | -- | -- | -- | -- |
| 487.49 | 1.03 | 11 | -1.31 | -- | -2.7 | -- | -- | -0.434 | -- | 24.4 | 682 | -- | -- |
| 258.14 | 0.748 | 10.9 | -- | 2.43 | -1.41 | -- | -- | -0.395 | 9.83 | 24.34 | 563 | -- | -- |
| 693.54 | 1.23 | 11 | -1.88 | -- | -- | -- | -- | -0.69 | -- | -- | -- | -- | -- |
| 297.39 | 0.807 | 10.9 | -- | 2.9 | -- | -- | -- | -0.496 | 9.24 | -- | -- | -- | -- |
| 530.93 | 1.07 | 10.9 | -- | -- | -2.94 | -- | -- | -0.258 | -- | 24.3 | 689 | -- | -- |
| 786.91 | 1.31 | 11 | -- | -- | -- | -- | -- | -0.481 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 135.16 | temperature | 25.0 | 270 | > th | dose independent | rect. | 14 | 7 |
| 4 | 136.58 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 16 | 12 |
| 7 | 137.14 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 16 | 14 |
| 12 | 137.22 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 12 | 12 |
| 18 | 137.60 | temperature | 25.0 | 10 | > th | dose independent | rect. | 16 | 7 |
| 23 | 138.01 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 14 | 13 |
| 45 | 139.87 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 16 | 7 |
| 69 | 141.07 | wind | 5.0 | 270 | < th | dose independent | rect. | 14 | 5 |
| 87 | 141.64 | temperature | 15.0 | 90 | > th | dose dependent | sin | 14 | NA |
| 103 | 142.24 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 14 | 7 |
| 107 | 142.39 | temperature | 10.0 | 270 | > th | dose dependent | sin | 16 | NA |
| 110 | 142.47 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 14 | 12 |
| 114 | 142.52 | wind | 5.0 | 270 | < th | dose independent | rect. | 13 | 7 |
| 157 | 143.14 | temperature | 25.0 | 90 | < th | dose independent | rect. | 1 | 10 |
| 172 | 143.35 | temperature | 25.0 | 270 | < th | dose independent | rect. | 15 | 8 |
| 204 | 143.62 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 19 | 6 |
| 207 | 143.63 | temperature | 25.0 | 270 | < th | dose independent | rect. | 13 | 11 |
| 216 | 143.74 | wind | 9.0 | 270 | < th | dose dependent | rect. | 14 | 5 |
| 240 | 143.92 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 10 |
| 296 | 144.37 | temperature | 30.0 | 90 | < th | dose dependent | sin | 16 | NA |
| 328 | 144.66 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 12 | 1 |
| 349 | 144.81 | temperature | 20.0 | 30 | > th | dose independent | rect. | 16 | 14 |
| 382 | 145.10 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 21 | 4 |
| 426 | 145.53 | temperature | 25.0 | 90 | > th | dose independent | rect. | 16 | 12 |
| 470 | 145.89 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 24 | 9 |
| 481 | 145.97 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 19 | 7 |
| 489 | 146.02 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 24 | 23 |
| 493 | 146.06 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 16 | 7 |
| 494 | 146.07 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 16 | 18 |
| 500 | 146.11 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 24 | 19 |
| 505 | 146.13 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 15 | 4 |
| 556 | 146.40 | temperature | 25.0 | 10 | < th | dose independent | rect. | 14 | 11 |
| 602 | 146.64 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 16 | 14 |
| 611 | 146.70 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 16 | 5 |
| 630 | 146.85 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 21 | 1 |
| 636 | 146.89 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 16 | 16 |
| 644 | 146.93 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 16 | 1 |
| 653 | 146.95 | wind | 7.0 | 270 | < th | dose independent | rect. | 24 | 20 |
| 656 | 146.96 | wind | 7.0 | 270 | < th | dose independent | rect. | 23 | 22 |
| 696 | 147.09 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 1 | 9 |
| 702 | 147.12 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 1 | 22 |
| 725 | 147.25 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 2 | 8 |
| 797 | 147.66 | humidity | 50.0 | 270 | > th | dose independent | rect. | 10 | 14 |
| 823 | 147.79 | radiation | 1.0 | 270 | > th | dose independent | rect. | 4 | 11 |
| 851 | 147.89 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 14 | 16 |
| 889 | 148.13 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 10 |
| 903 | 148.19 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 19 |
| 906 | 148.19 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 19 |
| 914 | 148.23 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 10 |
| 918 | 148.26 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 10 |
| 920 | 148.26 | temperature | 10.0 | 270 | > th | dose independent | rect. | 10 | 14 |
| 941 | 148.34 | wind | 9.0 | 270 | < th | dose independent | rect. | 24 | 10 |
| 944 | 148.35 | wind | 7.0 | 270 | < th | dose independent | rect. | 15 | 14 |
| 952 | 148.39 | humidity | 90.0 | 30 | < th | dose independent | rect. | 23 | 17 |