Os08g0557000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Protein-L-isoaspartate O-methyltransferase.
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Os08g0557000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Protein-L-isoaspartate O-methyltransferase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.65 | 0.208 | 12.9 | -0.348 | 0.134 | 0.842 | -0.212 | -0.965 | -0.141 | 14.7 | 21.1 | 781 | -- | -- |
| 20.25 | 0.21 | 12.9 | -0.127 | 0.147 | 0.751 | -0.202 | -- | -0.0801 | 15.7 | 20.93 | 812 | -- | -- |
| 19.78 | 0.207 | 12.9 | -0.35 | 0.152 | 0.831 | -- | -0.941 | -0.14 | 14.8 | 21.36 | 814 | -- | -- |
| 20.36 | 0.21 | 12.9 | -0.136 | 0.171 | 0.761 | -- | -- | -0.0827 | 15.5 | 20.77 | 843 | -- | -- |
| 20.4 | 0.21 | 12.9 | -0.332 | -- | 0.85 | -- | -0.957 | -0.139 | -- | 21.01 | 666 | -- | -- |
| 33.32 | 0.271 | 12.8 | 0.0782 | 0.273 | -- | -0.156 | -- | 0.0623 | 18.8 | -- | -- | -- | -- |
| 33.38 | 0.271 | 12.8 | 0.0806 | 0.273 | -- | -- | -- | 0.0618 | 18.9 | -- | -- | -- | -- |
| 21.01 | 0.213 | 12.9 | -0.129 | -- | 0.796 | -- | -- | -0.0835 | -- | 20.43 | 660 | -- | -- |
| 20.79 | 0.212 | 12.9 | -- | 0.162 | 0.724 | -- | -- | -0.0607 | 15.5 | 21 | 827 | -- | -- |
| 37.28 | 0.285 | 12.8 | 0.0747 | -- | -- | -- | -- | 0.0566 | -- | -- | -- | -- | -- |
| 33.55 | 0.271 | 12.8 | -- | 0.272 | -- | -- | -- | 0.0528 | 18.9 | -- | -- | -- | -- |
| 21.41 | 0.215 | 12.9 | -- | -- | 0.761 | -- | -- | -0.0633 | -- | 20.65 | 650 | -- | -- |
| 37.42 | 0.286 | 12.8 | -- | -- | -- | -- | -- | 0.0483 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.97 | temperature | 20 | 720 | > th | dose dependent | rect. | 13 | 20 |
| 17 | 19.54 | temperature | 20 | 720 | > th | dose dependent | rect. | 13 | 16 |
| 27 | 19.64 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 15 |
| 30 | 19.66 | temperature | 20 | 720 | > th | dose dependent | rect. | 7 | 21 |
| 67 | 19.84 | temperature | 20 | 720 | > th | dose dependent | sin | 16 | NA |
| 105 | 19.95 | temperature | 20 | 720 | > th | dose dependent | no | NA | NA |
| 134 | 20.03 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 155 | 20.07 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 23 |
| 171 | 20.15 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 8 |
| 194 | 20.18 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 203 | 20.19 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 209 | 20.19 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 281 | 20.29 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 23 |
| 374 | 20.46 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 7 |
| 455 | 20.56 | temperature | 25 | 1440 | < th | dose independent | rect. | 11 | 13 |
| 463 | 20.57 | temperature | 25 | 1440 | < th | dose independent | rect. | 13 | 11 |
| 483 | 20.59 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 21 |
| 521 | 20.64 | temperature | 25 | 1440 | > th | dose independent | rect. | 11 | 13 |
| 530 | 20.65 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 576 | 20.69 | temperature | 30 | 720 | < th | dose dependent | rect. | 10 | 19 |
| 604 | 20.72 | temperature | 25 | 1440 | > th | dose independent | rect. | 14 | 9 |
| 605 | 20.72 | temperature | 25 | 1440 | > th | dose independent | rect. | 13 | 11 |
| 699 | 20.80 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 6 |
| 712 | 20.82 | temperature | 25 | 1440 | < th | dose independent | sin | 18 | NA |
| 869 | 20.93 | temperature | 25 | 1440 | > th | dose independent | sin | 18 | NA |
| 940 | 20.98 | temperature | 30 | 720 | < th | dose dependent | rect. | 13 | 18 |