Os08g0555800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0555800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 133.85 | 0.544 | 2.89 | -0.0818 | 0.0967 | 0.366 | -0.42 | 1.8 | 0.173 | 11.3 | 0.6595 | 9 | -- | -- |
| 134.32 | 0.54 | 2.89 | -0.0615 | 0.1 | 0.726 | -0.49 | -- | 0.195 | 11.3 | 0.2793 | 36 | -- | -- |
| 134.57 | 0.54 | 2.89 | -0.1 | 0.102 | 0.357 | -- | 2.06 | 0.171 | 10.8 | 0.6152 | 8 | -- | -- |
| 135.44 | 0.542 | 2.9 | -0.0992 | 0.0891 | 0.735 | -- | -- | 0.179 | 11.7 | 0.09923 | 36 | -- | -- |
| 135.21 | 0.542 | 2.9 | -0.0993 | -- | 0.344 | -- | 1.97 | 0.171 | -- | 0.6244 | 8 | -- | -- |
| 137.75 | 0.55 | 2.9 | -0.0469 | 0.0596 | -- | -0.612 | -- | 0.164 | 11.8 | -- | -- | -- | -- |
| 139.25 | 0.553 | 2.9 | -0.0731 | 0.08 | -- | -- | -- | 0.16 | 9.21 | -- | -- | -- | -- |
| 135.95 | 0.543 | 2.9 | -0.113 | -- | 0.728 | -- | -- | 0.178 | -- | 0.09453 | 36 | -- | -- |
| 135.73 | 0.543 | 2.9 | -- | 0.0949 | 0.753 | -- | -- | 0.192 | 12.7 | 0.09195 | 36 | -- | -- |
| 139.62 | 0.552 | 2.9 | -0.0733 | -- | -- | -- | -- | 0.161 | -- | -- | -- | -- | -- |
| 139.39 | 0.552 | 2.9 | -- | 0.0799 | -- | -- | -- | 0.168 | 9.28 | -- | -- | -- | -- |
| 136.28 | 0.544 | 2.9 | -- | -- | 0.705 | -- | -- | 0.19 | -- | 0.09088 | 36 | -- | -- |
| 139.76 | 0.552 | 2.9 | -- | -- | -- | -- | -- | 0.169 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 128.01 | radiation | 1.0 | 90 | < th | dose independent | rect. | 8 | 3 |
| 2 | 128.01 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 8 | 3 |
| 3 | 128.09 | wind | 1.0 | 30 | < th | dose dependent | rect. | 23 | 5 |
| 17 | 128.94 | wind | 1.0 | 30 | < th | dose dependent | rect. | 3 | 1 |
| 20 | 129.04 | wind | 7.0 | 30 | > th | dose dependent | rect. | 12 | 3 |
| 23 | 129.08 | wind | 9.0 | 90 | > th | dose independent | rect. | 13 | 2 |
| 27 | 129.10 | wind | 9.0 | 10 | > th | dose independent | rect. | 13 | 1 |
| 65 | 130.40 | wind | 1.0 | 30 | < th | dose dependent | rect. | 11 | 17 |
| 75 | 131.15 | wind | 1.0 | 30 | < th | dose independent | rect. | 3 | 1 |
| 77 | 131.34 | radiation | 30.0 | 10 | > th | dose independent | rect. | 13 | 1 |
| 81 | 131.46 | wind | 1.0 | 30 | < th | dose dependent | rect. | 6 | 22 |
| 94 | 131.83 | wind | 1.0 | 30 | < th | dose independent | rect. | 23 | 5 |
| 110 | 132.22 | wind | 1.0 | 30 | < th | dose dependent | rect. | 23 | 1 |
| 120 | 132.37 | radiation | 20.0 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 135 | 132.50 | wind | 1.0 | 10 | < th | dose independent | rect. | 23 | 1 |
| 155 | 132.68 | radiation | 10.0 | 30 | > th | dose dependent | rect. | 17 | 14 |
| 174 | 132.77 | wind | 1.0 | 10 | < th | dose dependent | rect. | 12 | 13 |
| 180 | 132.80 | radiation | 10.0 | 30 | > th | dose independent | rect. | 17 | 14 |
| 185 | 132.82 | wind | 1.0 | 10 | < th | dose dependent | rect. | 5 | 19 |
| 218 | 132.99 | radiation | 10.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 244 | 132.99 | radiation | 10.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 307 | 133.11 | wind | 1.0 | 10 | < th | dose independent | rect. | 12 | 13 |
| 310 | 133.11 | wind | 1.0 | 10 | < th | dose dependent | rect. | 7 | 18 |
| 323 | 133.14 | wind | 1.0 | 30 | < th | dose dependent | sin | 15 | NA |
| 381 | 133.39 | wind | 1.0 | 90 | < th | dose independent | rect. | 7 | 17 |
| 414 | 133.45 | wind | 1.0 | 30 | < th | dose independent | rect. | 6 | 22 |
| 457 | 133.55 | wind | 1.0 | 30 | < th | dose independent | rect. | 11 | 17 |
| 509 | 133.70 | wind | 9.0 | 10 | < th | dose independent | rect. | 21 | 23 |
| 511 | 133.71 | wind | 3.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 535 | 133.76 | wind | 3.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 546 | 133.78 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 672 | 134.06 | wind | 7.0 | 30 | < th | dose independent | rect. | 7 | 23 |
| 678 | 134.08 | wind | 1.0 | 30 | > th | dose independent | rect. | 18 | 12 |
| 683 | 134.09 | wind | 1.0 | 10 | < th | dose dependent | rect. | 23 | 13 |
| 696 | 134.11 | wind | 1.0 | 10 | < th | dose dependent | rect. | 23 | 11 |
| 710 | 134.14 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 711 | 134.14 | wind | 1.0 | 10 | < th | dose dependent | rect. | 23 | 9 |
| 767 | 134.23 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 822 | 134.27 | wind | 1.0 | 30 | < th | dose independent | sin | 15 | NA |
| 837 | 134.32 | wind | 9.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 867 | 134.37 | wind | 1.0 | 10 | < th | dose dependent | no | NA | NA |
| 884 | 134.37 | wind | 1.0 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 885 | 134.37 | wind | 1.0 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 897 | 134.38 | wind | 1.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 918 | 134.41 | temperature | 20.0 | 90 | < th | dose independent | rect. | 22 | 1 |
| 924 | 134.43 | wind | 1.0 | 30 | > th | dose dependent | rect. | 18 | 23 |
| 932 | 134.45 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 933 | 134.45 | wind | 7.0 | 30 | > th | dose dependent | rect. | 12 | 5 |
| 941 | 134.47 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 20 | 1 |
| 952 | 134.49 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 956 | 134.50 | wind | 1.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 957 | 134.50 | wind | 3.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 958 | 134.50 | wind | 9.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 959 | 134.50 | temperature | 10.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 961 | 134.50 | temperature | 30.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 962 | 134.50 | humidity | 50.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 965 | 134.50 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 966 | 134.50 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 968 | 134.50 | radiation | 1.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 973 | 134.50 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 20 | 1 |
| 977 | 134.50 | temperature | 10.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 978 | 134.50 | wind | 9.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 980 | 134.50 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 985 | 134.50 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 991 | 134.51 | wind | 5.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 998 | 134.51 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 20 | 1 |