Os08g0552300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF241, plant family protein.
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Os08g0552300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF241, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 46.1 | 0.319 | 2.85 | 0.171 | 0.0855 | 0.00972 | -0.365 | 0.817 | 0.139 | 3.82 | 19.95 | 5842 | -- | -- |
| 46.68 | 0.318 | 2.88 | 0.118 | 0.0894 | -0.211 | -0.228 | -- | 0.132 | 4.01 | 19 | 10080 | -- | -- |
| 46.46 | 0.317 | 2.85 | 0.182 | 0.0804 | 0.0129 | -- | 0.841 | 0.144 | 3.33 | 19.97 | 6019 | -- | -- |
| 46.52 | 0.318 | 2.88 | 0.155 | 0.0815 | -0.284 | -- | -- | 0.121 | 3.41 | 15.9 | 16264 | -- | -- |
| 46.85 | 0.319 | 2.85 | 0.182 | -- | 0.0124 | -- | 0.838 | 0.144 | -- | 19.9 | 6036 | -- | -- |
| 47.37 | 0.323 | 2.89 | -0.0474 | 0.0847 | -- | -0.354 | -- | 0.0645 | 3.64 | -- | -- | -- | -- |
| 47.74 | 0.324 | 2.89 | -0.0418 | 0.0826 | -- | -- | -- | 0.0666 | 3.07 | -- | -- | -- | -- |
| 46.9 | 0.319 | 2.88 | 0.161 | -- | -0.289 | -- | -- | 0.125 | -- | 15.85 | 16251 | -- | -- |
| 46.83 | 0.319 | 2.89 | -- | 0.0902 | -0.194 | -- | -- | 0.0903 | 3.18 | 14.7 | 14914 | -- | -- |
| 48.13 | 0.324 | 2.89 | -0.0383 | -- | -- | -- | -- | 0.0687 | -- | -- | -- | -- | -- |
| 47.78 | 0.323 | 2.89 | -- | 0.0818 | -- | -- | -- | 0.0712 | 3.07 | -- | -- | -- | -- |
| 47.23 | 0.32 | 2.89 | -- | -- | -0.189 | -- | -- | 0.0916 | -- | 14.67 | 14893 | -- | -- |
| 48.17 | 0.324 | 2.89 | -- | -- | -- | -- | -- | 0.073 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 43.10 | radiation | 20.0 | 30 | > th | dose independent | rect. | 16 | 16 |
| 2 | 43.11 | radiation | 20.0 | 30 | > th | dose independent | rect. | 7 | 1 |
| 49 | 43.41 | radiation | 10.0 | 30 | > th | dose dependent | rect. | 7 | 1 |
| 176 | 44.02 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 24 | 5 |
| 177 | 44.03 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 17 | 15 |
| 199 | 44.09 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 1 | 7 |
| 250 | 44.16 | humidity | 80.0 | 90 | < th | dose independent | rect. | 1 | 7 |
| 263 | 44.18 | humidity | 70.0 | 90 | < th | dose dependent | rect. | 18 | 14 |
| 264 | 44.19 | humidity | 70.0 | 30 | < th | dose independent | rect. | 18 | 14 |
| 267 | 44.19 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 5 | 3 |
| 279 | 44.21 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 282 | 44.22 | humidity | 80.0 | 90 | < th | dose independent | rect. | 5 | 2 |
| 370 | 44.28 | humidity | 70.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 627 | 44.31 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 782 | 44.70 | temperature | 20.0 | 270 | < th | dose independent | rect. | 23 | 7 |
| 848 | 44.88 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 850 | 44.89 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 869 | 44.90 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 872 | 44.90 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 876 | 44.90 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 882 | 44.90 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 883 | 44.90 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 904 | 44.90 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 22 | 23 |
| 912 | 44.91 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 7 | 1 |
| 914 | 44.92 | temperature | 25.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 916 | 44.92 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 918 | 44.93 | humidity | 80.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 920 | 44.93 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 925 | 44.93 | radiation | 30.0 | 30 | < th | dose dependent | rect. | 21 | 14 |
| 926 | 44.94 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 929 | 44.94 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 937 | 44.95 | wind | 3.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 938 | 44.95 | wind | 5.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 941 | 44.95 | humidity | 90.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 944 | 44.95 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 955 | 44.96 | temperature | 10.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 957 | 44.96 | temperature | 30.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 958 | 44.96 | humidity | 50.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 961 | 44.96 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 963 | 44.96 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 965 | 44.96 | radiation | 1.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 970 | 44.96 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 20 | 1 |
| 972 | 44.96 | temperature | 10.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 973 | 44.96 | wind | 9.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 974 | 44.96 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 977 | 44.96 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 984 | 44.96 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 996 | 44.97 | temperature | 20.0 | 270 | < th | dose independent | rect. | 3 | 1 |
| 999 | 44.97 | wind | 1.0 | 30 | > th | dose dependent | rect. | 20 | 1 |