Os08g0551500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF241, plant family protein.
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Os08g0551500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF241, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 118.91 | 0.512 | 3.18 | -0.475 | 0.217 | 32.2 | -0.69 | -79.9 | -0.000392 | 11.7 | 1 | 3 | 23 | 2 |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 156.85 | 0.587 | 3.06 | -0.0289 | 0.15 | -- | -0.984 | -- | -0.0147 | 11.8 | -- | -- | -- | -- |
| 161.05 | 0.594 | 3.07 | -0.0687 | 0.154 | -- | -- | -- | -0.0191 | 11.6 | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 162.53 | 0.596 | 3.07 | -0.073 | -- | -- | -- | -- | -0.0208 | -- | -- | -- | -- | -- |
| 161.17 | 0.594 | 3.06 | -- | 0.155 | -- | -- | -- | -0.0114 | 11.6 | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 162.68 | 0.595 | 3.07 | -- | -- | -- | -- | -- | -0.0127 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 118.91 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 23 | 2 |
| 3 | 118.91 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 23 | 2 |
| 17 | 134.94 | wind | 1.0 | 90 | < th | dose dependent | rect. | 24 | 1 |
| 18 | 135.19 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 1 | 1 |
| 28 | 135.19 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 1 | 1 |
| 53 | 138.34 | wind | 1.0 | 270 | < th | dose dependent | rect. | 22 | 1 |
| 54 | 138.50 | wind | 1.0 | 270 | < th | dose dependent | rect. | 22 | 3 |
| 55 | 139.35 | wind | 1.0 | 30 | < th | dose independent | rect. | 24 | 2 |
| 80 | 140.60 | wind | 1.0 | 10 | < th | dose dependent | rect. | 23 | 1 |
| 94 | 140.71 | wind | 1.0 | 270 | < th | dose independent | rect. | 23 | 2 |
| 106 | 141.72 | wind | 1.0 | 270 | < th | dose dependent | rect. | 14 | 11 |
| 109 | 141.74 | wind | 1.0 | 270 | < th | dose dependent | rect. | 16 | 9 |
| 164 | 144.91 | wind | 1.0 | 270 | < th | dose independent | rect. | 16 | 9 |
| 165 | 144.91 | wind | 1.0 | 270 | < th | dose independent | rect. | 14 | 11 |
| 167 | 144.96 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 169 | 144.96 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 170 | 144.98 | wind | 1.0 | 270 | < th | dose dependent | rect. | 9 | 16 |
| 216 | 146.00 | wind | 1.0 | 10 | < th | dose independent | rect. | 17 | 8 |
| 220 | 146.03 | humidity | 60.0 | 10 | < th | dose independent | rect. | 10 | 1 |
| 224 | 146.03 | humidity | 60.0 | 10 | < th | dose dependent | rect. | 10 | 1 |
| 231 | 146.21 | wind | 9.0 | 10 | > th | dose independent | rect. | 19 | 16 |
| 252 | 146.42 | wind | 5.0 | 10 | > th | dose independent | rect. | 10 | 1 |
| 256 | 146.42 | wind | 5.0 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 260 | 146.44 | wind | 9.0 | 10 | > th | dose dependent | rect. | 19 | 16 |
| 332 | 146.71 | wind | 9.0 | 30 | > th | dose independent | rect. | 1 | 10 |
| 393 | 146.97 | wind | 1.0 | 270 | < th | dose dependent | sin | 16 | NA |
| 524 | 147.81 | radiation | 40.0 | 720 | > th | dose independent | rect. | 15 | 1 |
| 550 | 147.85 | wind | 1.0 | 10 | < th | dose dependent | rect. | 17 | 8 |
| 555 | 147.88 | radiation | 40.0 | 720 | > th | dose dependent | rect. | 15 | 1 |
| 597 | 148.06 | wind | 1.0 | 720 | < th | dose independent | rect. | 14 | 1 |
| 630 | 148.32 | wind | 1.0 | 270 | < th | dose independent | rect. | 9 | 16 |
| 650 | 148.69 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 20 | 1 |
| 652 | 148.69 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 662 | 148.73 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 686 | 148.94 | wind | 1.0 | 720 | < th | dose dependent | rect. | 14 | 1 |
| 767 | 149.75 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 22 | 19 |
| 770 | 149.77 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 22 | 19 |
| 772 | 149.77 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 22 | 19 |
| 775 | 149.79 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 776 | 149.79 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 23 | 5 |
| 798 | 149.94 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 802 | 149.99 | wind | 1.0 | 270 | < th | dose independent | sin | 15 | NA |
| 807 | 150.02 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 21 | 16 |
| 809 | 150.04 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 8 | 5 |
| 814 | 150.06 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 8 | 8 |
| 827 | 150.12 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 23 | 14 |
| 838 | 150.16 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 23 | 11 |
| 843 | 150.17 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 23 | 5 |
| 845 | 150.17 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 23 | 5 |
| 849 | 150.18 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 21 | 20 |
| 851 | 150.19 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 22 | 15 |
| 855 | 150.19 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 22 | 15 |
| 856 | 150.20 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 5 | NA |
| 857 | 150.20 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 5 | NA |
| 858 | 150.20 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 23 | 10 |
| 860 | 150.20 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 5 | NA |
| 863 | 150.20 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 23 | 10 |
| 866 | 150.21 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 10 |
| 868 | 150.21 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 2 | 15 |
| 869 | 150.21 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 2 | 15 |
| 871 | 150.21 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 10 |
| 874 | 150.21 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 2 | 15 |
| 879 | 150.24 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 10 |
| 896 | 150.26 | wind | 1.0 | 270 | > th | dose independent | rect. | 15 | 14 |
| 912 | 150.28 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 23 | 5 |
| 931 | 150.32 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 10 |
| 952 | 150.34 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 18 | 18 |
| 969 | 150.37 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 18 | 21 |
| 997 | 150.40 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 14 | 22 |