Os08g0551200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF630 domain containing protein.
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Os08g0551200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF630 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 46.76 | 0.321 | 2.8 | -0.0351 | 0.00532 | 0.326 | -0.0431 | 1.22 | 0.0406 | 11.8 | 61.41 | 15 | -- | -- |
| 47.82 | 0.322 | 2.8 | -0.0139 | 0.00389 | 0.48 | 0.0789 | -- | 0.0443 | 12.5 | 60 | 15 | -- | -- |
| 46.77 | 0.319 | 2.8 | -0.033 | 0.00572 | 0.443 | -- | 1.62 | 0.0402 | 12.1 | 61.39 | 16 | -- | -- |
| 47.84 | 0.322 | 2.8 | -0.0109 | 0.00231 | 0.477 | -- | -- | 0.0447 | 14.6 | 60 | 15 | -- | -- |
| 46.77 | 0.319 | 2.8 | -0.0337 | -- | 0.44 | -- | 1.6 | 0.0404 | -- | 61.34 | 16 | -- | -- |
| 48.89 | 0.328 | 2.8 | -0.0107 | 0.0248 | -- | 0.0988 | -- | 0.0388 | 12.5 | -- | -- | -- | -- |
| 48.93 | 0.328 | 2.8 | -0.0069 | 0.0245 | -- | -- | -- | 0.0393 | 12.5 | -- | -- | -- | -- |
| 47.84 | 0.322 | 2.8 | -0.0138 | -- | 0.481 | -- | -- | 0.0464 | -- | 60 | 15 | -- | -- |
| 47.85 | 0.322 | 2.8 | -- | 0.00391 | 0.479 | -- | -- | 0.0476 | 15.5 | 60 | 15 | -- | -- |
| 48.97 | 0.327 | 2.8 | -0.00776 | -- | -- | -- | -- | 0.0389 | -- | -- | -- | -- | -- |
| 48.94 | 0.327 | 2.8 | -- | 0.0246 | -- | -- | -- | 0.0401 | 12.6 | -- | -- | -- | -- |
| 47.85 | 0.322 | 2.8 | -- | -- | 0.479 | -- | -- | 0.0474 | -- | 60 | 15 | -- | -- |
| 48.97 | 0.327 | 2.8 | -- | -- | -- | -- | -- | 0.0398 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 46.06 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 2 | 46.16 | wind | 9.0 | 10 | > th | dose independent | rect. | 13 | 1 |
| 16 | 46.16 | wind | 9.0 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 40 | 46.34 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 9 | 1 |
| 43 | 46.38 | humidity | 80.0 | 90 | > th | dose independent | rect. | 10 | 2 |
| 47 | 46.42 | wind | 1.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 50 | 46.53 | humidity | 50.0 | 90 | < th | dose independent | rect. | 15 | 3 |
| 70 | 46.54 | wind | 1.0 | 30 | < th | dose independent | rect. | 15 | 1 |
| 71 | 46.54 | humidity | 50.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 118 | 46.54 | humidity | 50.0 | 10 | < th | dose dependent | rect. | 15 | 1 |
| 268 | 46.64 | humidity | 90.0 | 720 | > th | dose independent | rect. | 10 | 1 |
| 269 | 46.64 | humidity | 50.0 | 90 | < th | dose dependent | sin | 12 | NA |
| 273 | 46.66 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 9 | 2 |
| 276 | 46.66 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 9 | 2 |
| 298 | 46.72 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 1 | 1 |
| 302 | 46.73 | humidity | 50.0 | 90 | < th | dose independent | sin | 12 | NA |
| 303 | 46.73 | temperature | 25.0 | 30 | > th | dose independent | rect. | 1 | 1 |
| 311 | 46.75 | radiation | 1.0 | 90 | < th | dose independent | rect. | 8 | 3 |
| 326 | 46.78 | humidity | 50.0 | 90 | > th | dose independent | sin | 12 | NA |
| 328 | 46.78 | radiation | 1.0 | 90 | < th | dose independent | rect. | 8 | 1 |
| 348 | 46.91 | radiation | 30.0 | 10 | > th | dose independent | rect. | 13 | 1 |
| 367 | 46.97 | wind | 1.0 | 10 | < th | dose dependent | rect. | 11 | 1 |
| 378 | 46.99 | wind | 1.0 | 90 | < th | dose dependent | rect. | 11 | 1 |
| 408 | 47.11 | temperature | 25.0 | 30 | > th | dose independent | rect. | 20 | 6 |
| 439 | 47.14 | radiation | 20.0 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 467 | 47.21 | wind | 1.0 | 90 | < th | dose independent | rect. | 11 | 1 |
| 471 | 47.21 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 20 | 5 |
| 488 | 47.22 | radiation | 10.0 | 90 | < th | dose independent | rect. | 8 | 8 |
| 515 | 47.24 | wind | 1.0 | 10 | < th | dose independent | rect. | 11 | 1 |
| 525 | 47.25 | radiation | 10.0 | 720 | > th | dose independent | rect. | 8 | 1 |
| 622 | 47.35 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 6 | 1 |
| 628 | 47.35 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 6 | 1 |
| 639 | 47.36 | radiation | 40.0 | 30 | > th | dose dependent | rect. | 11 | 1 |
| 661 | 47.38 | wind | 1.0 | 10 | < th | dose independent | rect. | 11 | 5 |
| 678 | 47.41 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 1 | 1 |
| 683 | 47.41 | atmosphere | 995.0 | 720 | < th | dose independent | rect. | 14 | 1 |
| 727 | 47.41 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 728 | 47.41 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 1 | 1 |
| 733 | 47.41 | atmosphere | 995.0 | 720 | < th | dose dependent | rect. | 14 | 1 |
| 815 | 47.44 | wind | 7.0 | 10 | > th | dose dependent | rect. | 9 | 1 |
| 821 | 47.44 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 22 | 3 |
| 839 | 47.46 | atmosphere | 995.0 | 720 | > th | dose independent | sin | 6 | NA |
| 853 | 47.47 | temperature | 30.0 | 90 | > th | dose independent | rect. | 14 | 1 |
| 908 | 47.49 | atmosphere | 995.0 | 720 | < th | dose independent | sin | 6 | NA |
| 929 | 47.50 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 940 | 47.51 | atmosphere | 1005.0 | 90 | < th | dose independent | rect. | 14 | 1 |
| 941 | 47.51 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 946 | 47.51 | humidity | 50.0 | 270 | < th | dose independent | rect. | 12 | 4 |