Os08g0549600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Basic-leucine zipper (bZIP) transcription factor domain containing protein.
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Os08g0549600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Basic-leucine zipper (bZIP) transcription factor domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 52.47 | 0.34 | 3.03 | -0.337 | 0.13 | 0.135 | -0.93 | -0.219 | -0.0798 | 4.8 | 70 | 79 | -- | -- |
| 52.58 | 0.338 | 3.03 | -0.328 | 0.138 | 0.128 | -0.837 | -- | -0.0825 | 5 | 71 | 80 | -- | -- |
| 54.34 | 0.343 | 3.03 | -0.324 | 0.146 | 0.145 | -- | 0.147 | -0.0759 | 4.83 | 70 | 70 | -- | -- |
| 54.41 | 0.344 | 3.03 | -0.326 | 0.137 | 0.15 | -- | -- | -0.0738 | 4.92 | 69.87 | 79 | -- | -- |
| 55.14 | 0.346 | 3.03 | -0.316 | -- | 0.0809 | -- | 0.119 | -0.0726 | -- | 70.94 | 64 | -- | -- |
| 53.51 | 0.343 | 3.03 | -0.315 | 0.063 | -- | -0.91 | -- | -0.0796 | 5.45 | -- | -- | -- | -- |
| 55.41 | 0.349 | 3.03 | -0.316 | 0.077 | -- | -- | -- | -0.0751 | 8.12 | -- | -- | -- | -- |
| 55.14 | 0.346 | 3.03 | -0.319 | -- | 0.0898 | -- | -- | -0.0698 | -- | 70 | 60 | -- | -- |
| 57.21 | 0.352 | 3.02 | -- | 0.132 | 0.146 | -- | -- | -0.0366 | 4.92 | 70 | 79 | -- | -- |
| 55.73 | 0.349 | 3.03 | -0.315 | -- | -- | -- | -- | -0.0741 | -- | -- | -- | -- | -- |
| 58.04 | 0.356 | 3.02 | -- | 0.0754 | -- | -- | -- | -0.0399 | 8.43 | -- | -- | -- | -- |
| 57.82 | 0.354 | 3.02 | -- | -- | 0.0856 | -- | -- | -0.0352 | -- | 69.86 | 60 | -- | -- |
| 58.36 | 0.357 | 3.02 | -- | -- | -- | -- | -- | -0.0391 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 44.58 | humidity | 70.0 | 90 | < th | dose independent | rect. | 19 | 12 |
| 3 | 44.94 | humidity | 70.0 | 30 | < th | dose independent | rect. | 19 | 1 |
| 15 | 45.35 | humidity | 70.0 | 30 | < th | dose dependent | rect. | 19 | 1 |
| 88 | 46.69 | temperature | 30.0 | 90 | > th | dose independent | rect. | 18 | 1 |
| 102 | 46.77 | temperature | 30.0 | 90 | > th | dose dependent | rect. | 18 | 1 |
| 172 | 49.40 | humidity | 70.0 | 90 | < th | dose independent | sin | 10 | NA |
| 177 | 49.51 | humidity | 70.0 | 90 | > th | dose independent | sin | 10 | NA |
| 248 | 50.11 | humidity | 70.0 | 90 | < th | dose independent | rect. | 18 | 17 |
| 250 | 50.12 | radiation | 10.0 | 720 | > th | dose dependent | rect. | 6 | 1 |
| 276 | 50.22 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 20 | 11 |
| 287 | 50.26 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 1 |
| 299 | 50.26 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 1 |
| 300 | 50.26 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 20 | 11 |
| 335 | 50.44 | humidity | 70.0 | 90 | > th | dose independent | rect. | 21 | 14 |
| 351 | 50.51 | humidity | 80.0 | 90 | < th | dose dependent | sin | 10 | NA |
| 361 | 50.57 | humidity | 80.0 | 270 | < th | dose dependent | rect. | 16 | 19 |
| 363 | 50.59 | humidity | 80.0 | 270 | < th | dose dependent | rect. | 17 | 17 |
| 378 | 50.74 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 24 | 6 |
| 383 | 50.78 | radiation | 20.0 | 720 | < th | dose independent | rect. | 22 | 10 |
| 393 | 50.81 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 4 | 19 |
| 394 | 50.82 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 398 | 50.83 | radiation | 20.0 | 720 | < th | dose dependent | rect. | 22 | 9 |
| 399 | 50.84 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 2 | 6 |
| 427 | 50.90 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 454 | 50.92 | humidity | 70.0 | 10 | > th | dose independent | rect. | 22 | 12 |
| 459 | 50.92 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 490 | 50.97 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 502 | 50.99 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 22 | 8 |
| 514 | 51.01 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 522 | 51.03 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 3 | 3 |
| 527 | 51.03 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 20 | 13 |
| 530 | 51.04 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 6 | 1 |
| 554 | 51.08 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 22 | 6 |
| 559 | 51.09 | humidity | 80.0 | 720 | > th | dose independent | rect. | 6 | 2 |
| 561 | 51.09 | radiation | 20.0 | 270 | < th | dose independent | rect. | 20 | 13 |
| 566 | 51.09 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 4 | 4 |
| 586 | 51.10 | radiation | 30.0 | 30 | < th | dose independent | rect. | 23 | 11 |
| 604 | 51.11 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 5 | 3 |
| 618 | 51.12 | wind | 3.0 | 90 | > th | dose independent | rect. | 19 | 1 |
| 619 | 51.12 | humidity | 70.0 | 720 | > th | dose independent | rect. | 5 | 5 |
| 703 | 51.19 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 6 | 3 |
| 712 | 51.20 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 19 | 1 |
| 719 | 51.21 | radiation | 20.0 | 720 | < th | dose independent | rect. | 6 | 2 |
| 729 | 51.22 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 20 | 11 |
| 745 | 51.24 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 22 | 4 |
| 787 | 51.28 | radiation | 10.0 | 90 | > th | dose dependent | rect. | 6 | 1 |
| 789 | 51.28 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 21 | 3 |
| 816 | 51.30 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 24 | 7 |
| 840 | 51.32 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 19 | 11 |
| 843 | 51.32 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 2 | 6 |
| 844 | 51.32 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 8 | 10 |
| 881 | 51.34 | humidity | 70.0 | 720 | < th | dose dependent | rect. | 6 | 5 |
| 886 | 51.34 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 2 | 9 |
| 898 | 51.35 | humidity | 80.0 | 270 | < th | dose independent | rect. | 5 | 1 |
| 924 | 51.35 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 5 | 9 |
| 935 | 51.36 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 8 | 10 |
| 971 | 51.38 | radiation | 20.0 | 90 | < th | dose independent | rect. | 21 | 21 |
| 986 | 51.39 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 18 | 13 |
| 993 | 51.40 | humidity | 70.0 | 90 | < th | dose independent | rect. | 6 | 3 |