Os08g0546300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0546300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 236.54 | 0.723 | 6.11 | -0.995 | 1.83 | 1.98 | -0.785 | -1.76 | -0.693 | 17.9 | 81.15 | 1202 | -- | -- |
| 240.01 | 0.722 | 6.08 | -0.86 | 1.82 | 1.85 | -0.834 | -- | -0.65 | 18 | 79.31 | 1181 | -- | -- |
| 237.65 | 0.718 | 6.1 | -1 | 1.82 | 1.99 | -- | -1.76 | -0.677 | 17.9 | 79.18 | 1191 | -- | -- |
| 241.3 | 0.723 | 6.08 | -0.858 | 1.82 | 1.82 | -- | -- | -0.642 | 18 | 78.15 | 1202 | -- | -- |
| 271.08 | 0.767 | 6.07 | -0.857 | -- | 2.76 | -- | -2.89 | -0.762 | -- | 88.7 | 574 | -- | -- |
| 313.18 | 0.83 | 6.1 | -0.548 | 1.79 | -- | -0.746 | -- | -0.725 | 18.7 | -- | -- | -- | -- |
| 314.59 | 0.831 | 6.1 | -0.536 | 1.79 | -- | -- | -- | -0.728 | 18.7 | -- | -- | -- | -- |
| 281.33 | 0.781 | 6.06 | -0.702 | -- | 2.61 | -- | -- | -0.758 | -- | 89.91 | 589 | -- | -- |
| 259.26 | 0.75 | 6.07 | -- | 1.82 | 1.71 | -- | -- | -0.602 | 17.9 | 83.5 | 1189 | -- | -- |
| 481.29 | 1.03 | 6.06 | -0.577 | -- | -- | -- | -- | -0.763 | -- | -- | -- | -- | -- |
| 322.18 | 0.84 | 6.09 | -- | 1.79 | -- | -- | -- | -0.668 | 18.7 | -- | -- | -- | -- |
| 293.69 | 0.798 | 6.06 | -- | -- | 2.73 | -- | -- | -0.735 | -- | 109.1 | 573 | -- | -- |
| 490.07 | 1.03 | 6.05 | -- | -- | -- | -- | -- | -0.699 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 236.76 | wind | 7 | 43200 | > th | dose dependent | rect. | 13 | 9 |
| 4 | 237.24 | temperature | 25 | 720 | > th | dose dependent | rect. | 15 | 19 |
| 5 | 237.30 | wind | 7 | 43200 | > th | dose dependent | rect. | 13 | 17 |
| 7 | 237.44 | wind | 7 | 43200 | > th | dose dependent | rect. | 13 | 12 |
| 14 | 237.77 | wind | 7 | 43200 | > th | dose independent | rect. | 12 | 10 |
| 15 | 237.80 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 8 |
| 24 | 238.34 | wind | 7 | 43200 | < th | dose independent | rect. | 12 | 10 |
| 32 | 238.54 | wind | 7 | 43200 | > th | dose independent | rect. | 12 | 17 |
| 40 | 238.86 | wind | 7 | 43200 | < th | dose independent | rect. | 12 | 17 |
| 62 | 239.25 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 8 |
| 66 | 239.34 | humidity | 90 | 1440 | < th | dose dependent | rect. | 9 | 10 |
| 74 | 239.54 | humidity | 50 | 1440 | > th | dose dependent | rect. | 9 | 10 |
| 77 | 239.58 | wind | 7 | 43200 | > th | dose independent | sin | 18 | NA |
| 107 | 239.94 | wind | 7 | 43200 | < th | dose independent | sin | 18 | NA |
| 114 | 239.98 | wind | 7 | 43200 | > th | dose dependent | sin | 16 | NA |
| 151 | 240.49 | radiation | 1 | 720 | > th | dose independent | rect. | 7 | 12 |
| 193 | 240.82 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 286 | 241.47 | humidity | 90 | 1440 | < th | dose dependent | sin | 23 | NA |
| 385 | 242.10 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 416 | 242.28 | wind | 7 | 43200 | < th | dose independent | rect. | 3 | 18 |
| 423 | 242.30 | wind | 7 | 43200 | > th | dose independent | rect. | 3 | 18 |
| 491 | 242.59 | humidity | 50 | 4320 | > th | dose independent | rect. | 13 | 4 |
| 523 | 242.72 | humidity | 80 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 537 | 242.78 | humidity | 50 | 1440 | > th | dose dependent | sin | 22 | NA |
| 546 | 242.83 | wind | 7 | 43200 | > th | dose independent | rect. | 12 | 4 |
| 571 | 242.91 | wind | 7 | 43200 | < th | dose independent | rect. | 12 | 4 |
| 580 | 242.93 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 626 | 243.07 | radiation | 1 | 720 | < th | dose independent | rect. | 7 | 16 |
| 628 | 243.07 | humidity | 50 | 720 | > th | dose dependent | rect. | 5 | 18 |
| 660 | 243.18 | humidity | 80 | 1440 | < th | dose dependent | rect. | 16 | 2 |
| 708 | 243.34 | humidity | 70 | 720 | > th | dose independent | sin | 12 | NA |
| 711 | 243.34 | humidity | 80 | 1440 | < th | dose dependent | no | NA | NA |
| 714 | 243.36 | wind | 7 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 743 | 243.42 | wind | 7 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 745 | 243.43 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 16 |
| 756 | 243.46 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 792 | 243.55 | temperature | 25 | 720 | > th | dose dependent | rect. | 15 | 8 |
| 819 | 243.68 | humidity | 80 | 1440 | < th | dose dependent | rect. | 10 | 23 |
| 842 | 243.75 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 844 | 243.75 | humidity | 50 | 720 | > th | dose dependent | rect. | 3 | 20 |
| 885 | 243.90 | wind | 7 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 903 | 243.95 | humidity | 90 | 720 | < th | dose dependent | rect. | 15 | 6 |
| 911 | 243.98 | wind | 7 | 43200 | > th | dose independent | no | NA | NA |
| 918 | 244.00 | radiation | 30 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 946 | 244.04 | humidity | 60 | 1440 | < th | dose independent | sin | 16 | NA |
| 952 | 244.06 | wind | 7 | 43200 | < th | dose independent | no | NA | NA |
| 959 | 244.08 | humidity | 60 | 1440 | > th | dose independent | sin | 16 | NA |
| 970 | 244.12 | humidity | 60 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 973 | 244.12 | wind | 7 | 43200 | > th | dose independent | rect. | 20 | 23 |
| 978 | 244.13 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 22 |