Os08g0543400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transferase family protein.
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Os08g0543400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Transferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38.07 | 0.29 | 10.3 | -0.466 | 0.472 | -0.306 | 0.594 | -0.958 | -0.117 | 18.1 | 20.12 | 304 | -- | -- |
| 39.32 | 0.292 | 10.2 | -0.317 | 0.446 | -0.219 | 0.202 | -- | -0.0619 | 17.8 | 21.88 | 60 | -- | -- |
| 38.82 | 0.29 | 10.3 | -0.444 | 0.471 | -0.28 | -- | -0.777 | -0.109 | 18.2 | 20.16 | 282 | -- | -- |
| 39.41 | 0.292 | 10.2 | -0.319 | 0.447 | -0.216 | -- | -- | -0.0598 | 17.8 | 21.9 | 60 | -- | -- |
| 47.75 | 0.322 | 10.3 | -0.619 | -- | -0.242 | -- | -1.19 | -0.12 | -- | 21.6 | 1466 | -- | -- |
| 41.76 | 0.303 | 10.3 | -0.385 | 0.431 | -- | 0.201 | -- | -0.122 | 18.4 | -- | -- | -- | -- |
| 41.86 | 0.303 | 10.3 | -0.388 | 0.432 | -- | -- | -- | -0.121 | 18.4 | -- | -- | -- | -- |
| 49.05 | 0.328 | 10.2 | -0.333 | -- | -0.191 | -- | -- | -0.0699 | -- | 22.5 | 32 | -- | -- |
| 41.61 | 0.3 | 10.2 | -- | 0.468 | -0.249 | -- | -- | 0.00367 | 17.8 | 23.1 | 104 | -- | -- |
| 51.54 | 0.335 | 10.2 | -0.399 | -- | -- | -- | -- | -0.13 | -- | -- | -- | -- | -- |
| 45.82 | 0.317 | 10.2 | -- | 0.437 | -- | -- | -- | -0.0779 | 18.3 | -- | -- | -- | -- |
| 51.83 | 0.335 | 10.2 | -- | -- | -0.236 | -- | -- | -0.0203 | -- | 22.48 | 10 | -- | -- |
| 55.74 | 0.348 | 10.2 | -- | -- | -- | -- | -- | -0.086 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 36.51 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 2 | 36.67 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 4 | 36.78 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 22 | 2 |
| 5 | 36.81 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 22 | 10 |
| 7 | 36.88 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 12 | 37.00 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 16 | 37.10 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 18 | 37.12 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 22 | 2 |
| 21 | 37.15 | temperature | 20.0 | 10 | > th | dose dependent | sin | 10 | NA |
| 28 | 37.24 | temperature | 20.0 | 270 | > th | dose independent | rect. | 15 | 17 |
| 31 | 37.25 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 12 | 18 |
| 33 | 37.26 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 47 | 37.31 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 17 | 15 |
| 48 | 37.32 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 5 | 5 |
| 53 | 37.34 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 23 | 1 |
| 74 | 37.39 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 75 | 37.40 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 2 |
| 79 | 37.40 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 7 |
| 90 | 37.43 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 94 | 37.44 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 5 | 9 |
| 108 | 37.47 | temperature | 20.0 | 270 | > th | dose independent | rect. | 13 | 22 |
| 110 | 37.47 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 21 | 4 |
| 149 | 37.56 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 13 | 21 |
| 154 | 37.57 | temperature | 25.0 | 270 | < th | dose dependent | sin | 12 | NA |
| 155 | 37.57 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 168 | 37.58 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 21 | 3 |
| 172 | 37.59 | temperature | 30.0 | 10 | < th | dose dependent | sin | 10 | NA |
| 187 | 37.61 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 21 | 18 |
| 188 | 37.61 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 20 | 11 |
| 210 | 37.65 | humidity | 90.0 | 4320 | < th | dose independent | rect. | 5 | 5 |
| 231 | 37.67 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 5 | 9 |
| 236 | 37.68 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 7 | 2 |
| 247 | 37.69 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 250 | 37.69 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 3 |
| 257 | 37.70 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 17 | 6 |
| 268 | 37.71 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 21 | 8 |
| 272 | 37.72 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 288 | 37.73 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 16 | 9 |
| 294 | 37.74 | humidity | 90.0 | 4320 | < th | dose independent | rect. | 4 | 10 |
| 297 | 37.74 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 301 | 37.74 | humidity | 80.0 | 4320 | > th | dose dependent | rect. | 4 | 11 |
| 363 | 37.79 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 366 | 37.79 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 21 | 19 |
| 386 | 37.80 | humidity | 70.0 | 4320 | > th | dose dependent | rect. | 23 | 16 |
| 393 | 37.81 | temperature | 25.0 | 720 | < th | dose independent | rect. | 15 | 14 |
| 403 | 37.81 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 8 |
| 420 | 37.83 | temperature | 20.0 | 270 | > th | dose independent | sin | 14 | NA |
| 421 | 37.83 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 425 | 37.83 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 455 | 37.85 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 456 | 37.85 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 462 | 37.85 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 475 | 37.86 | temperature | 25.0 | 720 | < th | dose independent | rect. | 18 | 11 |
| 477 | 37.86 | temperature | 25.0 | 720 | < th | dose dependent | sin | 17 | NA |
| 497 | 37.88 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 524 | 37.89 | humidity | 90.0 | 4320 | > th | dose independent | sin | 3 | NA |
| 555 | 37.90 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 21 | 5 |
| 568 | 37.91 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 613 | 37.93 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 3 |
| 615 | 37.93 | temperature | 25.0 | 90 | > th | dose independent | rect. | 23 | 9 |
| 618 | 37.93 | humidity | 80.0 | 4320 | > th | dose dependent | sin | 3 | NA |
| 648 | 37.94 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 3 |
| 678 | 37.96 | temperature | 20.0 | 270 | > th | dose independent | rect. | 2 | 23 |
| 729 | 37.99 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 9 | 20 |
| 742 | 38.00 | temperature | 20.0 | 270 | < th | dose independent | sin | 13 | NA |
| 759 | 38.00 | humidity | 80.0 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 780 | 38.00 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 823 | 38.03 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 6 |
| 831 | 38.03 | temperature | 20.0 | 270 | < th | dose independent | rect. | 5 | 23 |
| 842 | 38.04 | temperature | 25.0 | 90 | < th | dose independent | sin | 10 | NA |
| 861 | 38.05 | temperature | 20.0 | 720 | > th | dose independent | rect. | 5 | 1 |
| 862 | 38.05 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 869 | 38.05 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 20 | 10 |
| 877 | 38.05 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 21 | 1 |
| 884 | 38.05 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 20 | 14 |
| 893 | 38.06 | temperature | 25.0 | 720 | > th | dose independent | rect. | 21 | 5 |
| 913 | 38.07 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 923 | 38.07 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 9 | 21 |
| 945 | 38.08 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 18 | 12 |