Os08g0543200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transferase family protein.
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Os08g0543200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Transferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 37.55 | 0.288 | 11.5 | -1.08 | 0.967 | 0.428 | -0.0373 | -1.53 | -0.176 | 16.6 | 20.2 | 1070 | -- | -- |
| 42.32 | 0.303 | 11.5 | -0.968 | 0.948 | 0.808 | 0.014 | -- | -0.156 | 16.4 | 18.74 | 2423 | -- | -- |
| 37.54 | 0.285 | 11.5 | -1.09 | 0.967 | 0.428 | -- | -1.54 | -0.178 | 16.6 | 20.2 | 1105 | -- | -- |
| 42.21 | 0.303 | 11.5 | -0.961 | 0.969 | 0.817 | -- | -- | -0.145 | 16.6 | 18.7 | 2419 | -- | -- |
| 84.26 | 0.428 | 11.5 | -1.17 | -- | 0.436 | -- | -1.77 | -0.203 | -- | 19.4 | 1964 | -- | -- |
| 52.6 | 0.34 | 11.5 | -0.57 | 0.932 | -- | 0.267 | -- | 0.0125 | 16.7 | -- | -- | -- | -- |
| 52.79 | 0.34 | 11.5 | -0.569 | 0.934 | -- | -- | -- | 0.0138 | 16.8 | -- | -- | -- | -- |
| 89.34 | 0.44 | 11.5 | -0.985 | -- | 0.784 | -- | -- | -0.173 | -- | 19.1 | 1979 | -- | -- |
| 59.79 | 0.36 | 11.5 | -- | 0.95 | 0.272 | -- | -- | 0.035 | 16.5 | 18.92 | 2395 | -- | -- |
| 98.98 | 0.465 | 11.5 | -0.604 | -- | -- | -- | -- | -0.0105 | -- | -- | -- | -- | -- |
| 61.32 | 0.366 | 11.5 | -- | 0.944 | -- | -- | -- | 0.0772 | 16.7 | -- | -- | -- | -- |
| 101.76 | 0.47 | 11.4 | -- | -- | -0.446 | -- | -- | 0.142 | -- | 20.7 | 47480 | -- | -- |
| 108.6 | 0.486 | 11.4 | -- | -- | -- | -- | -- | 0.0566 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 37.46 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 2 | 37.64 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 13 |
| 5 | 37.73 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 4 |
| 6 | 37.75 | humidity | 90 | 14400 | > th | dose dependent | sin | 3 | NA |
| 7 | 37.75 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 10 |
| 8 | 37.78 | temperature | 20 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 15 | 37.83 | humidity | 90 | 14400 | > th | dose independent | sin | 5 | NA |
| 16 | 37.83 | humidity | 90 | 14400 | > th | dose independent | rect. | 24 | 15 |
| 39 | 37.94 | temperature | 20 | 1440 | > th | dose independent | rect. | 17 | 11 |
| 47 | 37.97 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 9 |
| 49 | 37.97 | humidity | 90 | 14400 | > th | dose independent | rect. | 18 | 20 |
| 55 | 37.98 | temperature | 20 | 720 | > th | dose independent | rect. | 22 | 21 |
| 64 | 38.00 | temperature | 20 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 76 | 38.03 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 17 |
| 83 | 38.04 | temperature | 20 | 1440 | < th | dose independent | rect. | 17 | 11 |
| 106 | 38.09 | temperature | 20 | 1440 | < th | dose independent | rect. | 18 | 9 |
| 108 | 38.09 | temperature | 20 | 1440 | < th | dose independent | rect. | 18 | 17 |
| 150 | 38.15 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 15 |
| 151 | 38.15 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 15 |
| 163 | 38.16 | humidity | 90 | 14400 | > th | dose independent | rect. | 12 | 22 |
| 179 | 38.17 | humidity | 90 | 14400 | > th | dose independent | rect. | 8 | 23 |
| 199 | 38.19 | temperature | 20 | 1440 | > th | dose independent | sin | 12 | NA |
| 208 | 38.19 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 22 |
| 224 | 38.21 | humidity | 90 | 14400 | > th | dose independent | no | NA | NA |
| 238 | 38.22 | temperature | 20 | 1440 | < th | dose independent | sin | 12 | NA |
| 281 | 38.26 | humidity | 90 | 14400 | > th | dose independent | rect. | 2 | 23 |
| 299 | 38.28 | humidity | 90 | 14400 | > th | dose independent | rect. | 5 | 23 |
| 313 | 38.30 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 22 |
| 341 | 38.33 | temperature | 20 | 720 | > th | dose independent | rect. | 14 | 21 |
| 350 | 38.34 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 357 | 38.35 | temperature | 20 | 720 | > th | dose independent | rect. | 17 | 22 |
| 372 | 38.37 | temperature | 20 | 720 | < th | dose independent | rect. | 21 | 20 |
| 386 | 38.38 | humidity | 80 | 14400 | > th | dose dependent | rect. | 22 | 16 |
| 388 | 38.38 | humidity | 80 | 14400 | > th | dose dependent | rect. | 20 | 18 |
| 390 | 38.38 | humidity | 90 | 14400 | > th | dose dependent | rect. | 16 | 23 |
| 403 | 38.39 | humidity | 90 | 14400 | > th | dose dependent | rect. | 10 | 23 |
| 430 | 38.41 | humidity | 90 | 14400 | > th | dose dependent | rect. | 8 | 23 |
| 518 | 38.49 | humidity | 90 | 14400 | < th | dose independent | rect. | 22 | 17 |
| 524 | 38.49 | humidity | 80 | 14400 | > th | dose dependent | rect. | 17 | 10 |
| 535 | 38.50 | humidity | 90 | 14400 | < th | dose independent | rect. | 18 | 19 |
| 599 | 38.55 | humidity | 90 | 14400 | < th | dose independent | sin | 5 | NA |
| 631 | 38.56 | humidity | 80 | 14400 | > th | dose dependent | sin | 14 | NA |
| 643 | 38.57 | humidity | 80 | 14400 | > th | dose dependent | sin | 6 | NA |
| 649 | 38.58 | humidity | 90 | 14400 | > th | dose independent | rect. | 18 | 6 |
| 676 | 38.60 | humidity | 90 | 14400 | < th | dose independent | rect. | 18 | 6 |
| 725 | 38.62 | humidity | 80 | 14400 | > th | dose dependent | rect. | 16 | 15 |
| 731 | 38.63 | humidity | 90 | 14400 | > th | dose independent | sin | 15 | NA |
| 767 | 38.65 | humidity | 90 | 14400 | < th | dose independent | rect. | 2 | 9 |
| 836 | 38.69 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 4 |
| 864 | 38.70 | humidity | 90 | 14400 | < th | dose independent | rect. | 22 | 23 |
| 931 | 38.73 | humidity | 90 | 14400 | < th | dose independent | rect. | 6 | 23 |
| 942 | 38.74 | humidity | 90 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 972 | 38.75 | humidity | 90 | 14400 | < th | dose independent | no | NA | NA |
| 984 | 38.75 | humidity | 90 | 14400 | < th | dose independent | rect. | 2 | 23 |
| 986 | 38.75 | humidity | 90 | 14400 | < th | dose independent | rect. | 8 | 23 |
| 987 | 38.75 | humidity | 90 | 14400 | < th | dose independent | rect. | 11 | 23 |
| 999 | 38.76 | temperature | 20 | 720 | > th | dose independent | no | NA | NA |