Os08g0542000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Methionine aminopeptidase-like protein.
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Os08g0542000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Methionine aminopeptidase-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 42.16 | 0.305 | 12.4 | 0.175 | 0.59 | 0.119 | 0.146 | -5.95 | 0.391 | 21.9 | 29.3 | 2201 | -- | -- |
| 43.38 | 0.307 | 12.3 | 1.09 | 0.603 | -0.582 | 0.128 | -- | 0.454 | 21.7 | 28.8 | 2048 | -- | -- |
| 42.23 | 0.303 | 12.4 | 0.191 | 0.589 | 0.118 | -- | -5.9 | 0.397 | 21.9 | 29.4 | 2200 | -- | -- |
| 43.29 | 0.306 | 12.3 | 1.12 | 0.593 | -0.578 | -- | -- | 0.511 | 21.5 | 27.09 | 1813 | -- | -- |
| 61.77 | 0.366 | 12.4 | 0.212 | -- | 0.18 | -- | -5.28 | 0.429 | -- | 29.78 | 1523 | -- | -- |
| 53.29 | 0.342 | 12.3 | 0.958 | 0.543 | -- | 0.0156 | -- | 0.507 | 21.7 | -- | -- | -- | -- |
| 53.3 | 0.342 | 12.3 | 0.957 | 0.543 | -- | -- | -- | 0.507 | 21.7 | -- | -- | -- | -- |
| 61.09 | 0.364 | 12.3 | 1.11 | -- | -0.45 | -- | -- | 0.471 | -- | 29.2 | 5888 | -- | -- |
| 73.23 | 0.399 | 12.3 | -- | 0.581 | -0.365 | -- | -- | 0.336 | 21.9 | 30 | 2106 | -- | -- |
| 70.81 | 0.393 | 12.3 | 0.962 | -- | -- | -- | -- | 0.507 | -- | -- | -- | -- | -- |
| 77.44 | 0.412 | 12.3 | -- | 0.545 | -- | -- | -- | 0.401 | 21.9 | -- | -- | -- | -- |
| 90.84 | 0.444 | 12.3 | -- | -- | -0.34 | -- | -- | 0.512 | -- | 33.2 | 7275 | -- | -- |
| 95.24 | 0.456 | 12.3 | -- | -- | -- | -- | -- | 0.4 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 42.28 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 3 | 42.46 | temperature | 30 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 5 | 42.51 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 8 |
| 9 | 42.53 | temperature | 30 | 1440 | < th | dose independent | rect. | 7 | 5 |
| 11 | 42.53 | temperature | 30 | 1440 | < th | dose independent | rect. | 22 | 14 |
| 14 | 42.54 | temperature | 30 | 1440 | < th | dose independent | rect. | 20 | 16 |
| 19 | 42.55 | temperature | 30 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 23 | 42.57 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 5 |
| 24 | 42.58 | temperature | 30 | 1440 | > th | dose independent | sin | 6 | NA |
| 44 | 42.59 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 46 | 42.60 | temperature | 30 | 1440 | < th | dose independent | sin | 7 | NA |
| 140 | 42.70 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 8 |
| 180 | 42.72 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 15 |
| 215 | 42.73 | temperature | 30 | 1440 | < th | dose independent | rect. | 22 | 19 |
| 221 | 42.74 | wind | 7 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 227 | 42.75 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 2 |
| 233 | 42.75 | temperature | 30 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 235 | 42.76 | wind | 7 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 322 | 42.80 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 22 |
| 325 | 42.81 | temperature | 30 | 1440 | > th | dose independent | rect. | 15 | 2 |
| 331 | 42.82 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 342 | 42.83 | wind | 7 | 43200 | > th | dose dependent | rect. | 18 | 4 |
| 347 | 42.84 | temperature | 30 | 1440 | > th | dose dependent | sin | 7 | NA |
| 350 | 42.85 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |
| 459 | 42.85 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 501 | 42.91 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 20 |
| 512 | 42.92 | temperature | 30 | 1440 | < th | dose independent | rect. | 7 | 16 |
| 557 | 42.93 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 580 | 42.93 | temperature | 30 | 1440 | < th | dose independent | rect. | 7 | 20 |
| 627 | 42.94 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 630 | 42.95 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 5 |
| 799 | 43.14 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 896 | 43.26 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 12 |