Os08g0539200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0539200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 187.55 | 0.643 | 3.06 | -0.462 | 0.115 | 1.76 | -0.362 | -4.88 | -0.145 | 17.1 | 49.95 | 255 | -- | -- |
| 190.52 | 0.643 | 3.03 | -0.361 | 0.103 | 0.764 | -0.612 | -- | -0.145 | 16.4 | 50 | 265 | -- | -- |
| 187.72 | 0.638 | 3.06 | -0.47 | 0.13 | 1.73 | -- | -5.02 | -0.145 | 18.5 | 49.86 | 254 | -- | -- |
| 190.59 | 0.643 | 3.05 | -0.346 | 0.169 | 0.611 | -- | -- | -0.156 | 18.7 | 49.67 | 254 | -- | -- |
| 188.52 | 0.639 | 3.06 | -0.476 | -- | 1.85 | -- | -5.08 | -0.144 | -- | 49.72 | 254 | -- | -- |
| 192.87 | 0.651 | 3.05 | -0.303 | 0.236 | -- | 0.0478 | -- | -0.174 | 18.7 | -- | -- | -- | -- |
| 192.87 | 0.65 | 3.05 | -0.304 | 0.237 | -- | -- | -- | -0.174 | 18.6 | -- | -- | -- | -- |
| 191.79 | 0.645 | 3.04 | -0.378 | -- | 0.855 | -- | -- | -0.153 | -- | 49.02 | 254 | -- | -- |
| 193.78 | 0.648 | 3.03 | -- | 0.181 | 0.539 | -- | -- | -0.124 | 18.7 | 50 | 254 | -- | -- |
| 195.79 | 0.654 | 3.04 | -0.31 | -- | -- | -- | -- | -0.179 | -- | -- | -- | -- | -- |
| 195.3 | 0.654 | 3.04 | -- | 0.241 | -- | -- | -- | -0.14 | 18.5 | -- | -- | -- | -- |
| 195.33 | 0.651 | 3.03 | -- | -- | 0.726 | -- | -- | -0.119 | -- | 49.34 | 254 | -- | -- |
| 198.32 | 0.657 | 3.03 | -- | -- | -- | -- | -- | -0.144 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 182.08 | wind | 9 | 1440 | > th | dose independent | rect. | 22 | 4 |
| 9 | 182.08 | wind | 9 | 1440 | > th | dose dependent | rect. | 22 | 4 |
| 17 | 182.10 | wind | 9 | 90 | > th | dose independent | rect. | 22 | 12 |
| 18 | 182.11 | wind | 9 | 1440 | > th | dose independent | rect. | 22 | 1 |
| 22 | 182.11 | wind | 9 | 1440 | > th | dose dependent | rect. | 22 | 1 |
| 26 | 182.12 | wind | 7 | 90 | > th | dose independent | rect. | 22 | 1 |
| 28 | 182.12 | wind | 7 | 90 | > th | dose dependent | rect. | 22 | 1 |
| 30 | 182.15 | wind | 9 | 90 | > th | dose dependent | rect. | 22 | 12 |
| 110 | 184.20 | wind | 1 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 146 | 184.61 | wind | 1 | 30 | < th | dose dependent | rect. | 2 | 10 |
| 148 | 184.72 | wind | 1 | 10 | < th | dose independent | rect. | 7 | 1 |
| 166 | 184.82 | wind | 1 | 30 | < th | dose dependent | rect. | 4 | 6 |
| 195 | 184.91 | wind | 1 | 30 | < th | dose dependent | rect. | 4 | 4 |
| 227 | 185.17 | humidity | 60 | 10 | < th | dose independent | rect. | 17 | 1 |
| 231 | 185.24 | humidity | 70 | 10 | < th | dose independent | rect. | 19 | 1 |
| 349 | 185.60 | humidity | 60 | 90 | < th | dose dependent | rect. | 17 | 1 |
| 350 | 185.63 | humidity | 60 | 1440 | < th | dose independent | rect. | 17 | 1 |
| 386 | 185.65 | humidity | 60 | 10 | < th | dose dependent | rect. | 17 | 2 |
| 494 | 186.00 | humidity | 60 | 1440 | > th | dose independent | rect. | 17 | 1 |
| 496 | 186.03 | wind | 3 | 270 | > th | dose dependent | rect. | 19 | 4 |
| 537 | 186.24 | humidity | 60 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 587 | 186.30 | wind | 1 | 30 | < th | dose dependent | sin | 3 | NA |
| 620 | 186.38 | wind | 1 | 30 | < th | dose dependent | rect. | 4 | 14 |
| 639 | 186.46 | wind | 1 | 30 | < th | dose dependent | rect. | 4 | 12 |
| 648 | 186.51 | humidity | 50 | 1440 | < th | dose independent | rect. | 17 | 17 |
| 654 | 186.51 | humidity | 50 | 1440 | < th | dose dependent | rect. | 17 | 17 |
| 657 | 186.53 | wind | 1 | 30 | < th | dose independent | rect. | 4 | 4 |
| 696 | 186.56 | humidity | 50 | 1440 | > th | dose independent | rect. | 17 | 4 |
| 702 | 186.57 | wind | 1 | 30 | < th | dose independent | rect. | 2 | 9 |
| 719 | 186.59 | humidity | 50 | 1440 | > th | dose independent | rect. | 17 | 11 |
| 759 | 186.61 | humidity | 50 | 1440 | > th | dose independent | rect. | 17 | 7 |
| 765 | 186.62 | humidity | 50 | 1440 | > th | dose independent | rect. | 17 | 14 |
| 772 | 186.64 | wind | 1 | 30 | < th | dose independent | rect. | 2 | 6 |
| 823 | 186.74 | humidity | 50 | 1440 | < th | dose dependent | rect. | 16 | 19 |
| 824 | 186.75 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 19 |
| 825 | 186.75 | temperature | 30 | 270 | > th | dose dependent | rect. | 17 | 1 |
| 834 | 186.78 | wind | 1 | 30 | < th | dose dependent | rect. | 2 | 16 |
| 896 | 186.83 | humidity | 50 | 1440 | < th | dose independent | sin | 11 | NA |
| 921 | 186.88 | wind | 7 | 720 | > th | dose dependent | rect. | 12 | 4 |
| 971 | 186.96 | humidity | 70 | 10 | > th | dose independent | rect. | 16 | 12 |
| 997 | 186.98 | humidity | 50 | 1440 | > th | dose independent | sin | 11 | NA |