Os08g0539100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, DHHC-type domain containing protein.
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Os08g0539100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, DHHC-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 126.89 | 0.529 | 6.28 | -2.7 | 1.49 | -0.979 | 0.397 | 1.32 | -0.572 | 20.5 | 8.112 | 134 | -- | -- |
| 132.2 | 0.536 | 6.26 | -2.62 | 1.58 | -1.33 | 1.1 | -- | -0.528 | 21.6 | 9.709 | 173 | -- | -- |
| 127.18 | 0.525 | 6.28 | -2.71 | 1.49 | -0.99 | -- | 1.5 | -0.573 | 20.5 | 7.83 | 136 | -- | -- |
| 139.02 | 0.549 | 6.28 | -2.72 | 1.39 | -0.979 | -- | -- | -0.568 | 20.6 | 9.941 | 167 | -- | -- |
| 146.89 | 0.564 | 6.21 | -2.84 | -- | -1.6 | -- | 1.51 | -0.542 | -- | 1.342 | 651 | -- | -- |
| 149.69 | 0.574 | 6.26 | -2.71 | 1.46 | -- | -0.175 | -- | -0.533 | 17.5 | -- | -- | -- | -- |
| 149.75 | 0.573 | 6.26 | -2.71 | 1.46 | -- | -- | -- | -0.533 | 17.5 | -- | -- | -- | -- |
| 144.93 | 0.561 | 6.25 | -2.89 | -- | -1.73 | -- | -- | -0.604 | -- | 0.26 | 687 | -- | -- |
| 334.59 | 0.852 | 6.22 | -- | 1.42 | -0.975 | -- | -- | -0.293 | 20.4 | 10 | 159 | -- | -- |
| 260.27 | 0.754 | 6.24 | -2.76 | -- | -- | -- | -- | -0.569 | -- | -- | -- | -- | -- |
| 343.9 | 0.867 | 6.19 | -- | 1.5 | -- | -- | -- | -0.231 | 17.5 | -- | -- | -- | -- |
| 344.34 | 0.864 | 6.19 | -- | -- | -1.8 | -- | -- | -0.313 | -- | 10 | 667 | -- | -- |
| 461.47 | 1 | 6.17 | -- | -- | -- | -- | -- | -0.262 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 120.08 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 9 | 16 |
| 2 | 120.19 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 13 | 17 |
| 18 | 122.14 | radiation | 10.0 | 270 | < th | dose independent | rect. | 13 | 17 |
| 31 | 122.60 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 20 | 8 |
| 106 | 125.55 | radiation | 1.0 | 90 | > th | dose independent | sin | 23 | NA |
| 118 | 125.83 | wind | 5.0 | 270 | < th | dose independent | rect. | 20 | 8 |
| 178 | 126.84 | radiation | 10.0 | 720 | < th | dose dependent | sin | 17 | NA |
| 191 | 127.00 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 16 |
| 206 | 127.23 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 16 | 14 |
| 214 | 127.37 | wind | 3.0 | 270 | < th | dose independent | rect. | 3 | 6 |
| 223 | 127.46 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 4 | 7 |
| 236 | 127.61 | temperature | 10.0 | 10 | > th | dose dependent | sin | 17 | NA |
| 243 | 127.66 | temperature | 25.0 | 720 | < th | dose independent | rect. | 18 | 15 |
| 244 | 127.66 | humidity | 70.0 | 270 | > th | dose independent | rect. | 13 | 17 |
| 250 | 127.75 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 13 | 7 |
| 259 | 127.82 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 260 | 127.82 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 262 | 127.83 | wind | 3.0 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 264 | 127.83 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 13 | 4 |
| 271 | 127.87 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 9 | 16 |
| 272 | 127.87 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 9 | 16 |
| 273 | 127.88 | wind | 3.0 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 277 | 127.89 | wind | 5.0 | 270 | < th | dose dependent | rect. | 3 | 6 |
| 284 | 127.93 | temperature | 15.0 | 270 | > th | dose independent | rect. | 4 | 16 |
| 292 | 127.98 | wind | 3.0 | 14400 | > th | dose independent | rect. | 2 | 6 |
| 296 | 127.99 | radiation | 1.0 | 10 | < th | dose independent | sin | 6 | NA |
| 302 | 128.00 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 11 |
| 309 | 128.03 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 11 | 11 |
| 310 | 128.04 | radiation | 1.0 | 270 | < th | dose independent | rect. | 23 | 22 |
| 345 | 128.16 | wind | 9.0 | 270 | < th | dose independent | rect. | 4 | 16 |
| 351 | 128.20 | humidity | 50.0 | 270 | > th | dose independent | rect. | 16 | 14 |
| 356 | 128.21 | temperature | 25.0 | 720 | < th | dose independent | sin | 11 | NA |
| 367 | 128.25 | radiation | 1.0 | 90 | > th | dose independent | rect. | 8 | 11 |
| 377 | 128.26 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 22 | 7 |
| 379 | 128.26 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 20 | 8 |
| 385 | 128.27 | temperature | 10.0 | 270 | > th | dose independent | rect. | 20 | 8 |
| 386 | 128.27 | temperature | 30.0 | 270 | < th | dose independent | rect. | 20 | 8 |
| 387 | 128.27 | humidity | 50.0 | 270 | > th | dose independent | rect. | 20 | 8 |
| 390 | 128.27 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 20 | 8 |
| 391 | 128.27 | radiation | 1.0 | 270 | < th | dose independent | rect. | 20 | 8 |
| 398 | 128.27 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 4 | 16 |
| 408 | 128.29 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 13 | 9 |
| 418 | 128.32 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 20 | 7 |
| 419 | 128.32 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 20 | 7 |
| 422 | 128.33 | radiation | 1.0 | 10 | > th | dose independent | sin | 6 | NA |
| 425 | 128.33 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 6 | 3 |
| 432 | 128.34 | wind | 3.0 | 14400 | < th | dose dependent | sin | 5 | NA |
| 439 | 128.36 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 20 | 8 |
| 440 | 128.36 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 18 | 16 |
| 446 | 128.37 | radiation | 1.0 | 90 | > th | dose independent | rect. | 6 | 13 |
| 463 | 128.41 | wind | 3.0 | 14400 | < th | dose independent | sin | 6 | NA |
| 467 | 128.41 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 484 | 128.46 | wind | 3.0 | 14400 | > th | dose independent | rect. | 23 | 9 |
| 488 | 128.47 | wind | 3.0 | 14400 | < th | dose independent | rect. | 23 | 15 |
| 494 | 128.48 | wind | 3.0 | 14400 | < th | dose independent | rect. | 23 | 9 |
| 521 | 128.56 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 8 |
| 523 | 128.56 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 8 |
| 557 | 128.64 | wind | 3.0 | 14400 | > th | dose independent | sin | 6 | NA |
| 568 | 128.67 | wind | 1.0 | 270 | > th | dose independent | rect. | 20 | 8 |
| 584 | 128.71 | wind | 3.0 | 14400 | > th | dose independent | rect. | 23 | 15 |
| 590 | 128.71 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 597 | 128.73 | radiation | 10.0 | 720 | > th | dose independent | rect. | 11 | 7 |
| 755 | 129.05 | radiation | 10.0 | 90 | < th | dose dependent | no | NA | NA |
| 762 | 129.06 | temperature | 30.0 | 270 | < th | dose independent | rect. | 15 | 15 |
| 769 | 129.08 | temperature | 15.0 | 270 | > th | dose independent | rect. | 6 | 10 |
| 792 | 129.12 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 795 | 129.12 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 21 | 19 |
| 841 | 129.16 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 846 | 129.18 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 2 | 18 |
| 855 | 129.20 | wind | 9.0 | 270 | < th | dose independent | rect. | 16 | 14 |
| 859 | 129.21 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 10 |
| 862 | 129.21 | radiation | 1.0 | 10 | < th | dose independent | rect. | 22 | 16 |
| 868 | 129.21 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 10 |
| 870 | 129.21 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 13 | 15 |
| 874 | 129.22 | radiation | 1.0 | 90 | < th | dose independent | rect. | 21 | 18 |
| 898 | 129.26 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 10 |
| 899 | 129.26 | temperature | 10.0 | 270 | > th | dose independent | rect. | 16 | 14 |
| 905 | 129.27 | radiation | 10.0 | 720 | > th | dose independent | sin | 16 | NA |
| 929 | 129.30 | humidity | 90.0 | 720 | < th | dose independent | rect. | 13 | 5 |
| 931 | 129.31 | radiation | 10.0 | 720 | < th | dose independent | sin | 15 | NA |
| 958 | 129.36 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 10 |
| 999 | 129.38 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 15 | 23 |